Gene Mpal_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2330 
Symbol 
ID7272051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2478253 
End bp2479464 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content61% 
IMG OID643570935 
Productcobalt ABC transporter, ATPase subunit 
Protein accessionYP_002467338 
Protein GI219852906 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA TCATCGAAGC ACGGGATATC AGGTATCGGT ACCCGGGGAG CCGAGAGGCG 
ATCAGGGGGA TCAGTTTCCA TATCCGTCCG GGTGAGAAGA TCGCGCTCGT GGGCCCCAAC
GGCGCCGGCA AGTCCACGCT GTTGCAGATG TTCAATGGTA TGATCCGTCC GGACGCTGGC
ACCATGCTCT TCGATAATGA ACCGATCCGG TACGATACCC GGTCCCTCCG TCAGCTCCGA
CGACGGGTCG GGTACGTGCT GCAGAACTCC GACCGTCAGA TCATCGCGCC GACCGTGTAC
CAGGACGTGG CGTTCGGCCC GGCCAACCTT GGGTTCGATG AGCCGGCTAT CCGACGGGCT
GTTGCGCTTG CCCTCCAGTA TGTCGGGCTC GAGGGGTTCG AGCGCCGCCC GCCTCACCAG
CTCTCTGGCG GAGAGAAGAA ACGGGTGGCG ATCGCCGGGG TGCTCGCCAT GGACCCTGAC
GTGCTGGTCT TCGACGAGCC GACGAGCGGC CTCGACCCTG CCGGCTCGGA GGATCTCATG
GAATTGCTCG ATGAGTTGCA CCATGACGGA AAGACGGTGA TCATCTCCAC CCATGATGTC
GAACTGGCGT ATCCGTGGGC AGACCGGGCG ATCCTCCTGC TCGACGGCAG GATCCTCAAG
GAGGACGTGC CGGACGTGGC GTTCGGGAAC ACCGAGTATG TGCGGAGAGC GCACCTCTCG
GTGCCGACCC TCCTCGAACT CTCACAGGAG CTCGGGCGGC GCGGGTTCGT TCAGCCTGAC
CATAAACCAC GCAGTGTCCT TGATATGGTC TATATCCTCG AGCACATCCA TCACGAGGCC
TGCGTTCATC CGACGCCGGG TACTATCTCG GTCTGCAATG TCGATGAGGT GGAGACGTCA
TCGATCGCCG CGTGGGTGAA TGATCACCCT GGCCTCGCAA TTGGGGCGAT GGGAACCCGT
GCGAAACAAT GTGCCACCCT GGAGGACCTG ACCCTCGAGT TCACCTATGG GGTGATCGAC
AAATGCATCC TTCGCGCGCT CAGTGGGCAG GACTCGCTGA TCCTGACCTC CAGCAGCATG
GCCGGTCGGG TGGTGACCCG GGTCGAGGCA TACTGTTGGG AGAGTAGGAC CACCATCACC
GTTCTCCCCT GGAGCATGAT GAATCAGGCT CCAAAAGAGG GTCTTACGAA TGAGGAGGTC
AAGGAAGGAT GA
 
Protein sequence
MSIIIEARDI RYRYPGSREA IRGISFHIRP GEKIALVGPN GAGKSTLLQM FNGMIRPDAG 
TMLFDNEPIR YDTRSLRQLR RRVGYVLQNS DRQIIAPTVY QDVAFGPANL GFDEPAIRRA
VALALQYVGL EGFERRPPHQ LSGGEKKRVA IAGVLAMDPD VLVFDEPTSG LDPAGSEDLM
ELLDELHHDG KTVIISTHDV ELAYPWADRA ILLLDGRILK EDVPDVAFGN TEYVRRAHLS
VPTLLELSQE LGRRGFVQPD HKPRSVLDMV YILEHIHHEA CVHPTPGTIS VCNVDEVETS
SIAAWVNDHP GLAIGAMGTR AKQCATLEDL TLEFTYGVID KCILRALSGQ DSLILTSSSM
AGRVVTRVEA YCWESRTTIT VLPWSMMNQA PKEGLTNEEV KEG