| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2321 |
|---|
| Symbol | |
|---|
| ID | 7270582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2469831 |
|---|
| End bp | 2470787 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643570926 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_002467329 |
|---|
| Protein GI | 219852897 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1041] Predicted DNA modification methylase |
|---|
| TIGRFAM ID | [TIGR01177] conserved hypothetical protein TIGR01177 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.334147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.512947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTGA TCTGCCTCCT CTCAGGGGAA CATCCGGTCC TCCCGGCCAA AGAACTCGAG
GTTGCAGGTA TGCTTACCGA CCTCTGGCCC CAGGTGGCCG TGATGGACTG TCCGGATCCA
GAAAAGACAG GCCGGCTCGC CCAGACACAT CTGGTGCTCA GGTATCTCGA TACCTGTGAG
CCAACGCTGG AGGCGGTCAG AACGATGCTT GCCGATCTGG CCCTCTCGCC TGATGGAACC
TTTGCGGTCA GGGCGAAGAA GGTCTGTGGT ACCCCAATCG AGGCAGAACC GCCGGCGATC
GAACGGTTCG CCGGCGGTCT GATCCAAGGA AAGGTCTCTC TCGCCGCCCC GGATCACGAG
TTCCACTTGG TTTTCTCAGG GGACCGGTGC TTCTGCGGCG AGCTCCTCCT CCGGATCGAC
CGGAGGACGA TGGACCTGCG CAACCCGTAC GGGCGGCCGT TCTTTCACCC CGGCGTGATG
ATGCCGAGGA TGGCACGGAC GCTGGTGAAC CTCTCGCTCG CCGAGCCGGG AGAGATCCTC
TACGACCCGT TCTGCGGCAC CGGGGGGACG ATGCTCGAGG CTGACCTGAT CGGGATCCAG
GCGTACGGCT CAGACACCGA TCGGGCGATG CTGATCGGTT CCCGACAGAA CCTGCCCAAA
GCCGGGGTGC TGGCCGGCGA TGCAACCTGC CTGCCGGTGA AATCCGCCGC TGTCGACGCG
GTCGTCTCCG ACCTGCCGTA CGGGCAGTCG GTGCCAATCA TCGCCCCGAG CCTGGAGAAA
TTATACTCCG GCTCGCTCGA GGAGATCCGG CGGATCCTCA AGCCGGGCAG GCGGGCCGTG
ATCGTCACTC ACCAACCGAT CGGTTTGATC GCGCAGGAGT ACCTGACCGT CCTCGGCCAG
TACGAACAGC GGGTGCACAA ATCGCTGACC CGCCGGATCC TGGTCTTAGA GAAGTGA
|
|---|
| Protein sequence | MKVICLLSGE HPVLPAKELE VAGMLTDLWP QVAVMDCPDP EKTGRLAQTH LVLRYLDTCE
PTLEAVRTML ADLALSPDGT FAVRAKKVCG TPIEAEPPAI ERFAGGLIQG KVSLAAPDHE
FHLVFSGDRC FCGELLLRID RRTMDLRNPY GRPFFHPGVM MPRMARTLVN LSLAEPGEIL
YDPFCGTGGT MLEADLIGIQ AYGSDTDRAM LIGSRQNLPK AGVLAGDATC LPVKSAAVDA
VVSDLPYGQS VPIIAPSLEK LYSGSLEEIR RILKPGRRAV IVTHQPIGLI AQEYLTVLGQ
YEQRVHKSLT RRILVLEK
|
|---|
| |