Gene Mpal_2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2308 
Symbol 
ID7270569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2455976 
End bp2456740 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content56% 
IMG OID643570913 
Productmethyl-coenzyme M reductase, gamma subunit 
Protein accessionYP_002467316 
Protein GI219852884 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4057] Methyl coenzyme M reductase, gamma subunit 
TIGRFAM ID[TIGR03259] methyl-coenzyme M reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.544756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACA AACCACAGTA TGGACCAGGA ACATCGGTTG TCGCTGAAAA CCGGCGCAAG 
TACATGGACC CTGGACACAA GCTGGAAAAG GTCCGTGACA TCACGGATGA GGACATTGTA
CTGATTATGG GGCACCGTGC ACCAGGTTCG GCATACCCAA CTGCACACCC CCCACTGGCA
GAGCAGCAGG AACCAAACTG CCCAGTCAGA AAACTGGTCA CCCCAACCGA GGGTGCAAAG
GCCGGCGACC GTGTCCGATA TATCCAGTTC GCAGACTCGA TGTTCAACGC ACCAAGCCAG
CCCTATGAAC GAACCTACCT CGAGATGTAC CGCTTCCGTG CAATCGACCC AGGTACGCTC
TCTGGCCGCC AGATCGTCGA GTGCCGCGAG CGCGACCTCG AAAAGTACGC AAAGGAACTG
CTCAACACCG AACTCTTCGA CCCGGCCCGA GTCGGCGTTA GGGGTGCCAC AGTCCACGGT
CACTCGCTTC GTCTCGATGA AGACGGCATG ATGTTCGATA TGCTCCAGCG CTGTGTCTTC
GACAAGAAGG ACGGCATTGT CAAGTACGTC AAGAACCAGA TCGGTGAACC ACTCGACCGT
GCAGTCCCAG TCGGGAAGCC AATGGATGAG AAGTGGCTCA AGGCACACAG CACGATCTTC
CACTCACTCG ACGGTGTCGC ATTCCGTGAC GACCCAGAGT ACGTTGAGTA CATTCAGCGG
ATCCACTCGC TGAGGACCAA GTATGGCTTC ATGCCAAAGG AGTGA
 
Protein sequence
MAYKPQYGPG TSVVAENRRK YMDPGHKLEK VRDITDEDIV LIMGHRAPGS AYPTAHPPLA 
EQQEPNCPVR KLVTPTEGAK AGDRVRYIQF ADSMFNAPSQ PYERTYLEMY RFRAIDPGTL
SGRQIVECRE RDLEKYAKEL LNTELFDPAR VGVRGATVHG HSLRLDEDGM MFDMLQRCVF
DKKDGIVKYV KNQIGEPLDR AVPVGKPMDE KWLKAHSTIF HSLDGVAFRD DPEYVEYIQR
IHSLRTKYGF MPKE