| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2272 |
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| Symbol | |
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| ID | 7272570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2426977 |
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| End bp | 2429754 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570881 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002467284 |
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| Protein GI | 219852852 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAAA ACAATCAGCG TCTGGACCTG ATTCGGGAAC TGCTCAGTGC GCACCCCCAG
GGACTCAGCG TCACCGAGAT CGCAGCGGCT CTTGGCGTCA ATAAGAACTC TACGGGCAGG
TCTCTGGACA CCCTCTATGC CGCTGGGGAG ATCAGGATGC GCCGGTTCGG CATGGCAAAA
CTCTACACTA GCGCCGCACG TATGCCACTC TCTGCCATGA TGTCCCTCCT CTCGAACCCG
ATTCTCATCG CCGATGCCGA CCAGACAATC ACCTTCATCA ATGACCCTTT CCTCTCCCTG
CTCAACCTGA CCAGAGAGCA GGTGATCAAC AGGCACATCA CCACCGTCAG AGGGGTAGCA
CCCGACATCG AAGGGCTGGA GGCCGCCTTC GACGCCGCCA CCGAGCAGGG AGAGGTGAAG
GAGATGATCC GGTTCAGCGG AGAGGAGGAG AGGATCTTCC TGCGGCGGTG TGTTCCGGTC
ACCCTGGAGA CCGACGCAGC CGGAACCGCC GTGATTATGA AGGAACTCAC CGCCCAGATC
AGGGCTGAGC AGGCGCTGCA TGAGCAGGAG AACCAGTTCA CAGAGGTCAT CGAGAACCTT
CAGGACATCT ACTACCAGAC AGATCAGGAC GAGATCCTGA CGTATGCAAA CCGGCAGATC
CTCCCATTCC TTGGCTACGA CTCGATGGAT CAGGTGCTTG GACACACTGC ATCCTCATTC
TGGGCAGAGC CGGAGAAACG AAAGAAGTTT CTCAACCTTG TGCGGAAGCG AGGGGCTATC
AATGATTTTG AGACCTCCCT GTTGAGGGCA GATGGATCCC AGGTTCCGAT CTCGACCAGC
AGCCACCTCC GCTTCGCCCG TAACGGAGAG GTTCTGGGGC TGGGCGGTAC TATAAGGGAT
ATCTCCTGGA GAAAGAAGAA TGAGGAGAAA ATTCAGGTCC TGAGTGCACA TAATCGGGCG
ATGATCGAGG CGAACTTGGA CCCGATCGTA TCGGTCGACC GCGACGGGCT CATCACTGAT
GTGAACGAGG CCACCGTAGC CATCACCGGA TATCCACGTG AACAACTGAT CGGATCGCGA
TTCAACCAGT ACTTTGCTGA CCAGATCCAG GCCGAGCAGC TCTTCGGAGA GGTCGTCCAT
TCCGGGCAGA TCCGGAACAG ACTTGCCAGC ATGCTGCATG CAGACGGGCA CAGGACACCG
GCCCTCTGCA ATGCCGCACT CTGCCGTAAC GAGGATGGGA CGATCAGCGG GATCTTTGTT
TCGCTTCGGG ACATCACGGA TCAGGAGAAG ATGGATCGCG ATCTGACCCG AAATGAGAGG
ATGCTCCAGA TGACGGAAGC GGTCTTCACC CTCTCAGAAC AGCCGATCGT AATCGGGTTC
CCAGATGGAG GGGTTGCCTA TGCGAACCCA GCCCTCTGCA GGATGCTCGG GTTCACCGAG
AAGGAACTGA AAGCGCTGGA CTGGAGGACC GACCTTACAT CACAGGAGTG GCAGGAGACG
GATTCCAGCG TTCTGGAGAA GCAGGCGCTG ACCGGGGAGC CACAGAAGTA TAGGAAGGAA
TTGCTGCACA AGGACGGATA TCCGGTGCCA GTGGAGATCG TCATGCACCT CATCCGCGTG
ACCAGAGATC AAAACCCCTG CTTCTGCTGC TACCTCACCG ATATCAGTAG GGACCTGCAA
GCGGCGAAGC AGCGGGCTGC AGGCGAACTG CGGTTCCAAC ACTTCTTAAA CGCTGCACCG
ATCGGCGTGC TGACCGCTGA CAGTGGAGGG AGGATCGTGA CGGTCAACAG GAGGATGGCC
CGGCTGTTCG GGCACTCTTC CAATGATCTG GAGGGGCGGT TGACCATCGA GGTGCTTGAA
CAGGCTGATC TCGGAGAGAA GCACCGTTTT AGAGAGATAC TCATCAACGG AGCAGAGAAC
ATCCCGGTAG ATATCAGGCA GAAGGATGGA AGACCTGTCG AGATGCTGCT GACCGTGGCT
CCGGTCACGG ATCAACAGAA CCAGTATCAG GGAATGGTCG GGTTCCTGAT CGATCAGACC
AAGACGAAGA AACAGGAACG GATACTGATC GAAGCCGGCC GGCGAATCTC CGCAATGATC
GATCAGGTCC CCCTGATAGC GCTGAAATTC GATCGGACCG GAGAACTCAT CTCATGCAAC
GATGCTCTGA TCGCAACGAC CGGCTGGACC AGAAACCAGG TGCTGGGCAG GGACTGGCAC
CGGCACCTGG TCCCGCCCGG AGAGACAGGG GACCGCGACC TGACCATGCA GGATCTGGTC
AAGGGAGACC AGAAGGACTG GACCGGACCA GTGCTGACCG CCGACGGACG GAAACTGCAG
ATCCGATGGA CCTGCCTGAT GCTTCTGGAC GACCAGCAAC AGTTTGAAGG GACCATCTGC
CTCGGCGAGG AGGTCACCGA GCAGCGTCAA CTGGCCGTGC TTCTCTCCAG AACCGAGGAG
GAGTATCAGG ACCTCATAGA GATAAATCCG TATCCGACAG TGCTGATCGA TGCCGACTGG
ACGATCACCC GGGTCAACCG GGAGTTCACC ACCGCCCTGC ATTACACGGT CCCAGAGAGA
CCGAAGAAAC TGACGTTCCT CTCGATCGTC AGCCCGGAGA ACAGACCGGC TGTGACTATG
CTGCTGAATG AAGAGGTCAG CCACGCAACC TGCACGCTGG TCCAGGAGGA CGGGAGACCG
ATCATCGCCA CGATTCGGCC CGGCCCCTGC AGAGGAGACC GACCCCGGAT GCTGGTGTTG
ATGATCGATC AAGTATAG
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| Protein sequence | MIQNNQRLDL IRELLSAHPQ GLSVTEIAAA LGVNKNSTGR SLDTLYAAGE IRMRRFGMAK
LYTSAARMPL SAMMSLLSNP ILIADADQTI TFINDPFLSL LNLTREQVIN RHITTVRGVA
PDIEGLEAAF DAATEQGEVK EMIRFSGEEE RIFLRRCVPV TLETDAAGTA VIMKELTAQI
RAEQALHEQE NQFTEVIENL QDIYYQTDQD EILTYANRQI LPFLGYDSMD QVLGHTASSF
WAEPEKRKKF LNLVRKRGAI NDFETSLLRA DGSQVPISTS SHLRFARNGE VLGLGGTIRD
ISWRKKNEEK IQVLSAHNRA MIEANLDPIV SVDRDGLITD VNEATVAITG YPREQLIGSR
FNQYFADQIQ AEQLFGEVVH SGQIRNRLAS MLHADGHRTP ALCNAALCRN EDGTISGIFV
SLRDITDQEK MDRDLTRNER MLQMTEAVFT LSEQPIVIGF PDGGVAYANP ALCRMLGFTE
KELKALDWRT DLTSQEWQET DSSVLEKQAL TGEPQKYRKE LLHKDGYPVP VEIVMHLIRV
TRDQNPCFCC YLTDISRDLQ AAKQRAAGEL RFQHFLNAAP IGVLTADSGG RIVTVNRRMA
RLFGHSSNDL EGRLTIEVLE QADLGEKHRF REILINGAEN IPVDIRQKDG RPVEMLLTVA
PVTDQQNQYQ GMVGFLIDQT KTKKQERILI EAGRRISAMI DQVPLIALKF DRTGELISCN
DALIATTGWT RNQVLGRDWH RHLVPPGETG DRDLTMQDLV KGDQKDWTGP VLTADGRKLQ
IRWTCLMLLD DQQQFEGTIC LGEEVTEQRQ LAVLLSRTEE EYQDLIEINP YPTVLIDADW
TITRVNREFT TALHYTVPER PKKLTFLSIV SPENRPAVTM LLNEEVSHAT CTLVQEDGRP
IIATIRPGPC RGDRPRMLVL MIDQV
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