| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2258 |
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| Symbol | |
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| ID | 7272555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2409445 |
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| End bp | 2411145 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643570868 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002467272 |
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| Protein GI | 219852840 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.866363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCG GGTATTCGAT CTTCCTCATC ACTGCGGCCG TCGTCACCGC TCTCCTCGCC
GTTTACACAG GGTGGCAACG TCGCCAGGCC ATCAGAAGTA CCACCGGGAT TGTCCTGCTC
CTCATCGCCA TCGCCCTGTA CCTCAGCGGA TACGGGATGG AACTGGCCAG CACCGACCTG
GCCGGCATGC TCTTCTGGAG CAGGATCCAG TACTTCGGAA TCGCATCGAT CCCGCCCCTG
CTGCTGATCG TGGTGCTCGG ATATACCAAC CAGACCCGGC ACCTCTCCCC AGCGGTTCTC
GCCGTTCTCT CGATCATCCC GGTGATCACC CTCGTGCTGG TCCTGACCCA GAACCCTCTC
CACTACCAGA CCGTCAGCGT CGATACCTCC CTCCCATTTC CACGGCTGGC CTTCACCCCG
GGGGTCTGGT ATTTTGTCAA TACATGGTAC CTGTTCACAT CGCAGGCTGT TGGGGTAGCA
CTGCTCGTGC GGGCGTTCTA CAAAAATACC CAACCACTGT ATAAGAAACA GATCCTGATC
ATGGCTATCG GTGTGATCGC TCCGTTCATC GCTTTCATCC TCTACCTTGC CGGCCTCTCC
CCGGTCCCTC ACCTGGACCT GGTCCCGTTC GCACTCGTCA TCACTGCAAC AGCGTCCTTC
ATCGGGATCC TCTCATTCCG GCTCTTCGAC CTAGTCCCGA TCACCCACTC AGTCATCCTC
CAGAGGATCC CAGTCGGGGT GATGGTCGTC GACGATCTGG AACGGGTCAC CAAGGTGAAC
CCAGCAGCTG AAGCGGCATT CGGCCTTGCT CCAGGGGAGG GGATCGGCCA GCTGGCCGCG
CTGCTGACCG AGCAGTTTCC AGAGTTGCCC GCGATCCTCA GGCACGCCCG TCCGGGCATC
GAGACGGAGA TCAGATATGG CAACAAGCAC TTCACCTTCG AGGTGGTCCA CCTCGGAGAT
GAGGATGACC GGCCGGTGGG AGGGGTGCTG CTCATCCGGG ATATCAGCCT CTGGAGACAG
ACCGAGGAGG TGCTCCTCAG ACGAACCGAC GAACTTGAGG TGGCCAACCG GCAGCTCGCG
CTCATCTCGG CGATCACCAG ACACGATATC AGCAACCATC TGGTGGTGAT CAGCGGGTAC
CTGGATCTAC TCCTTGAGGA CCAGTTGACA CCTGCACAGG CCGGGGTGGT TGAACTGGTT
CAAGATGCTG CCAGTCGGGT CGGCCAGATG GTCACCTTCA TGCGCGACTA CCAGGCGATC
GGCACCTCGG CTCCAGTCTG GACCGACCTC CGGTGTATAA CAGAGCAGGC TACAGCAGAG
GTGGCACTTG GGAACGTGCA GATCGAAAAC CTGCTCCCTG CCATCGAGGT GCTGGCCGAC
CCGCTGATCA AGAAGGTAAT CACCACTCTC TTTGAGAATG CGATCCGGCA CGGAAAAACG
GTTACCAGGA TCCTCCTCTC TGCCAAGACC GATCCGGCCG GCTTCACGAT CGTCTGCGAG
GACGACGGGG GTGGGGTGGA GGCTGACAAA AAGGAGCGAA TCTTTGAACG TGGATATGGT
AGCAACACCG GCCTCGGCCT CTTCCTGGCC CGCGAGATCC TCGCGATCAC CGGGATGACG
ATCGCGGAGA CTGGGATCCC CGGCGTCGGG GCACGGTTCG AGATCCAAGT GCCTCCCGAG
CGGTACAGAA CCCAGTCCTA A
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| Protein sequence | MITGYSIFLI TAAVVTALLA VYTGWQRRQA IRSTTGIVLL LIAIALYLSG YGMELASTDL
AGMLFWSRIQ YFGIASIPPL LLIVVLGYTN QTRHLSPAVL AVLSIIPVIT LVLVLTQNPL
HYQTVSVDTS LPFPRLAFTP GVWYFVNTWY LFTSQAVGVA LLVRAFYKNT QPLYKKQILI
MAIGVIAPFI AFILYLAGLS PVPHLDLVPF ALVITATASF IGILSFRLFD LVPITHSVIL
QRIPVGVMVV DDLERVTKVN PAAEAAFGLA PGEGIGQLAA LLTEQFPELP AILRHARPGI
ETEIRYGNKH FTFEVVHLGD EDDRPVGGVL LIRDISLWRQ TEEVLLRRTD ELEVANRQLA
LISAITRHDI SNHLVVISGY LDLLLEDQLT PAQAGVVELV QDAASRVGQM VTFMRDYQAI
GTSAPVWTDL RCITEQATAE VALGNVQIEN LLPAIEVLAD PLIKKVITTL FENAIRHGKT
VTRILLSAKT DPAGFTIVCE DDGGGVEADK KERIFERGYG SNTGLGLFLA REILAITGMT
IAETGIPGVG ARFEIQVPPE RYRTQS
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