| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2251 |
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| Symbol | |
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| ID | 7272548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2398892 |
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| End bp | 2399947 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643570863 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_002467267 |
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| Protein GI | 219852835 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.258726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACT CCTCTGATGA TCACTGGGAT CACCTGCGTG AGCAGATTAT CGGACTTGGT
GAACATTCCA CCCGTAAGAA CTATTACCCG GAACTGCAAG CACAACTTAC AGATCTGGAA
CGGTTCAGGG CCCTCCTCGA CCAGTCCAAT GATGCTATCC TGCTGATCCA ACTGCCTGTA
GGGAGAATAA CAGACCTGAA CTGGTCCGCC TGCGAACAGC TTGGGTACCG GCGGGACGAG
TTGCTCAATC TCCAGATCAG CGATCTGACA CCCCCCGGTA CCCCCGATCC CTCCAGACTG
GTAACTGCAG ACCTGCACCC AACGCAGACC CTGACCACCT GCCTGCTCAG GCAGGATGGA
AGCAAGATCT GCGTGGAGAT GACTATTCGG TTCACCAGTT TTGGCGGAAA TGACTATCTG
GTGGCCGTGG CCAGGGACAT CTCCGAAAGG AATCGGATTC TGGAGGCACT GACCGAGTCG
GAGAACCGGT ACAGGAGGGT CGTTCAGCAG GTCTCCGATG GGCTGATGAT CGTGGACCCG
GAGAACGAGG GGATTGTGGA GACGAATATG GCACTCCAGC AGTTGCTTGG ATATACAGCT
GGGGAACTGG TCCACCTCTC ACCTGTCGAT CTGGTGGCTG ACGGGTCGAC AACTCTGACC
GCAGATCCGT CCGCCACAGT CCCGGTCGAG GGGGAACTGA TCCGCAAGGA TAGAAGCCGG
GTTCCGGTGG AGGTCCGGAA GAACCCGATC ACCTATCCAG AAGGAAAGGT GGTCTTCTGC
TGGATGATCC GGGACATCCG GGGACGCCGG GAACTCGATC GGATCAAGCG GGAGGCCCTA
CAGCAGATCG AGCAGAACAT CGTGCAGTTT GCAACCCTCG GCGACCATAT CAGAAACCCG
CTGGCGGTGA TCGTCGGGCT CGCAGACCTG GAGGAGGGGA TATATACCAA ACAGATTCTC
AGGCAGGCAG AGGAGATCGA CAGGATCATC GACCGTCTCG ACCGAGGGTG GTTCGAATCA
GAGAAGGTCA GATCCTTCAT CAAGAAGTAC TATTGA
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| Protein sequence | MKNSSDDHWD HLREQIIGLG EHSTRKNYYP ELQAQLTDLE RFRALLDQSN DAILLIQLPV
GRITDLNWSA CEQLGYRRDE LLNLQISDLT PPGTPDPSRL VTADLHPTQT LTTCLLRQDG
SKICVEMTIR FTSFGGNDYL VAVARDISER NRILEALTES ENRYRRVVQQ VSDGLMIVDP
ENEGIVETNM ALQQLLGYTA GELVHLSPVD LVADGSTTLT ADPSATVPVE GELIRKDRSR
VPVEVRKNPI TYPEGKVVFC WMIRDIRGRR ELDRIKREAL QQIEQNIVQF ATLGDHIRNP
LAVIVGLADL EEGIYTKQIL RQAEEIDRII DRLDRGWFES EKVRSFIKKY Y
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