Gene Mpal_2248 details

Gene Information

• Locus tag: Mpal_2248
• ID: 7272545
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosphaerula palustris E1-9c
• Kingdom: Archaea
• Replicon accession: NC_011832
• Strand: +
• Start bp: 2395433
• End bp: 2396059
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643570860
• Product: CheC, inhibitor of MCP methylation
• Protein accession: YP_002467264
• Protein GI: 219852832
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.194157
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.143894
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACCAAA TGCCACAGGT GCTGACCGGC GAGAAGCGGG ACGCCCTGAC AGAACTGATC 
AACATCGGTG TCGGAAAAGC AGCCGGGATG CTGAACCAGA TGACCTCGCA CCAGATCTCG 
CTGCGGGTCC CATCGATCGA CCTGGTGACT CTCGATGACC TCAATGAAGT GGTGTATGGG 
CGGGTTGACG ATCGACAGGC AGCCGTGAAG ATGGACTTCT CCGGCTCGTT CTCCGGCACA 
GCGGCCCTGA TTTTTCCGAC TGCCAGTGCG GCCCAGTTGG TCTCGTGCCT GACCGACGAG 
GAACAGGGAA CCCCCGACCT CGACGCACTC AGGGCAGTGA CCCTGATCGA GGTGGGGAAT 
ATTGTCGTGA ACTGTGTGAT GGGTTCGATC ACGAATATGC TCAATGAGCA TGTCAGGTAC 
AGCCTTCCCA TCTACTTGGA GGGATCGATC GCGGCACTTG TACATTCTGA TGCAGCAGCC 
CTCAACGAGT GGATGCTGTT CATAAAGACC CGATTCAGTA TCGAACACCT CCATATTGAG 
GGGGATATTC TGCTGATCCT GGAGACCAGA TCGCTGGACG CCCTCTTCGC GGGGATCGAC 
AAATTGAGTG CAGGACCTGC TGAATAA 

 

Protein sequence

MNQMPQVLTG EKRDALTELI NIGVGKAAGM LNQMTSHQIS LRVPSIDLVT LDDLNEVVYG 
RVDDRQAAVK MDFSGSFSGT AALIFPTASA AQLVSCLTDE EQGTPDLDAL RAVTLIEVGN 
IVVNCVMGSI TNMLNEHVRY SLPIYLEGSI AALVHSDAAA LNEWMLFIKT RFSIEHLHIE 
GDILLILETR SLDALFAGID KLSAGPAE