| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2228 |
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| Symbol | |
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| ID | 7272525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2378714 |
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| End bp | 2379610 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643570840 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_002467244 |
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| Protein GI | 219852812 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0387564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCG AGGAACTGAG GTTCGGCACC GAGCTGCTGA AGCGCGGATT CGCGTCCATG
CAGAAGGGTG GTGTGATCAT GGATGTGGTC AACGCAGATC AGGCGCGGAT CGCTGAGGAA
GCGGGGGCTG TCGCTGTGAT GGCCCTTGAG CGGGTACCGG CAGAGATCAG AAAAGCCGGT
GGGGTGGCCA GGATGGCGGA CCCAGATCGT GTGACCGGAA TCATCGATGC GGTCAGCATC
CCGGTGATGG GTAAGGTCAG GATCGGTCAC TTTATCGAGG CCCGGGTGCT CGAATCGCTT
GGGGTCGATA TGATTGATGA GAGCGAGGTA CTGACACCTG CTGATGAAGA ATATCATATT
CGGAAGACTG AATTTGATGT TCCATTCGTC TGCGGTGCGC GGAATCTCGG CGAGGCTCTC
CGTCGGATCG ATGAAGGCGC AGCCATGATC CGGACCAAGG GCGAGGCTGG CACCGGCAAC
GTCGTCGAGG CCGTCAGGCA CATGCATGCG ATCATGGGCG AGATCCGGCA GCTCAAAGGG
CTCGACCGAC AGGAGCTGAT CGACCGGGCC CGGTCGATCG AGGCGCCGAC AGCCCTCGTC
ATCGAGTGTG CTGAGCGGGG AAGACTTCCG GTCGTGAACT TCTCGGCTGG TGGGATAGCG
ACCCCCTCGG ATGCGGCCCT GATGATGCAC CTCGGTGCAG ACGGTGTATT TGTCGGTTCA
GGAATTTTCC TCTCCAGCAA CCCGGCCCGA ACGGCCAAGG CTGTCGTCGA GGCGGTCAAC
CACTACCAGG AGCCGGCTGT GATCGCTGAG GTCTCCCGCG GGCTTGGCGA GGCGATGAAG
GGGATCGATG TTCATACTCT CAAGGACGAC GAGGTGCTCC AGTTCCGTGG ACGTTAA
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| Protein sequence | MKLEELRFGT ELLKRGFASM QKGGVIMDVV NADQARIAEE AGAVAVMALE RVPAEIRKAG
GVARMADPDR VTGIIDAVSI PVMGKVRIGH FIEARVLESL GVDMIDESEV LTPADEEYHI
RKTEFDVPFV CGARNLGEAL RRIDEGAAMI RTKGEAGTGN VVEAVRHMHA IMGEIRQLKG
LDRQELIDRA RSIEAPTALV IECAERGRLP VVNFSAGGIA TPSDAALMMH LGADGVFVGS
GIFLSSNPAR TAKAVVEAVN HYQEPAVIAE VSRGLGEAMK GIDVHTLKDD EVLQFRGR
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