Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2222 |
Symbol | |
ID | 7270308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2372938 |
End bp | 2374755 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643570834 |
Product | histidine kinase |
Protein accession | YP_002467238 |
Protein GI | 219852806 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0226681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCC TGGTCGGGGT AGTCTTATCG ATCGGGATCC TCTCTGGTTT TACCTATAAT GAGGCCAGGT CCGTGCTTGT GACGCATGAC CTGGAGACCC GAAATTATGC AGAGGCTGGT CTGATCGGAT CCTACACGCT GATGGATCGG GATCTCACCC TCTTCGACGA CTTCTTCTCA GACAGCCTGA AGAACAGTTT TCCTACATTT CTCGATGCAT ACAACCGCTC TGGCGGGGAT CCCCGGAATA TCGATCTGAA TGCACTGAAA GAGCAGCTCG GTGGGGACAT CGATCTCTAT GTGATCGATG ATCACGACAT GGTGATTGCG ACCACCTACA CACATGACCT CGGAATGAAC CTCTCCGAGT TTACCGGTTT TTCAGAGACG CTGGCGAAGA TGCGAAACGG GAGCGGATAC TATGCAGACC GTGTCACCCG TGAACAGGAC ACCGGTATAT TTCGGAAGTA CGCCTATTAT CCAACTCCTG ATCACCGTTA TCTGCTCGAA CTCGGCCTCA ATGACGCAGG GTTCATGGCG CGCAGGAACG TCTCGTTTGT AAAGACTGCG CAGCAGGTTC AGGCAGATAA CCCTTCCCTG GTGTTGGTGC GGACCTTCAA CATCTATGGA GAGCAGATTG GGGATCGGAC TGCAAAGGTA GATCCCGGGT TGAATGAACT GCTCAACCAG GTGATCGCGA ACCGGTCGAC CCTTGAGGTC AGGGATACCA CCAATGCCAC CCTGACCAGG TTCCGGTTTG TGGACCTGAA GAACCCGGTG TATGCATCTG ATCCGAGTCT GGTGATCGAG TTCGTTTACA CCACCCGCCC GCTCGACGAA GCCCTCTTCC GGCTCACCCT CGAGCACCTG TTGATCGGTC TGCTCGCCCT GGTTCTCGGG GCCCTCTTTG CGTCCGGTGT ATCGGTGCTG GTTGTCCGCC CGATCCGCCA GATCATCGGA GATGTCGAGG CGATCGCGAA CGGGAACCTC AACCACCCGA TAGGAAAGGT CTGGATGGTG GAGTTCGATG CCCTCCGGCA GAGCATCCAC CTGATGGTCG ACCGGCTCAA AGAACAGGTG AACCAGATCA CGCAGCAGAA CGAGGTGCTT GAGGCCAGGG TCGAGATGAG AACCCGGCAG TTGGTCCAGA GCAATGAGGA GGTGCATCTG TACCTGGACA TCATGACCCA TGATATCAAC AACACGCTGA CCGTAGCACT TGCTTCTGCC GAGATGCTCA ACGATATACT CCCCCCCGGC CATCCGACCG AGCATAAGAT CAAGGTCAAC CGGATCACGA CGGCTATTCA GAAATCGGTC GGGATCATCG CCAGGGTATC GATGATCAGC AGGGTCCACG ATTCCGATAT CCCGCTTGGT GAGATCTCTC TCGATCACGA GGTTCTGGAT GCGATAGGGC ACTACCCTGA CGCTTCCATC GAATATGCCG AGACTTCGCT GCAGGTCTGC GCAGACCAGT TCCTCTCTGA GGTCTTTGTG AACCTCCTTG GTAACAGCCT GAAGTTCGGG GGACCTGATG TCAGGGTCAG GGTGGCTGTC GAGGTCGACG AGGAGGATGT GACGATCTCG GTTGAGGATT CCGGCCCCGG GATCTCCGAC TTGGTCAAGC CCAAGGTCTT TGGAAGATTT GCACGCGGCG AGGGGCATGG AACGGGGTCT GGTCTCGGTC TCTTCATCGC GGCCTCGCTG GTGGCCCGGT ATGGAGGGCA GATCTGGGCT GATGACCGTG TCGCCGGCTC TCCAGAACTG GGGGCGGCGA TCCGGTTCAC CCTCCCCCGC CACTGCTTTG AGGAGTGA
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Protein sequence | MLILVGVVLS IGILSGFTYN EARSVLVTHD LETRNYAEAG LIGSYTLMDR DLTLFDDFFS DSLKNSFPTF LDAYNRSGGD PRNIDLNALK EQLGGDIDLY VIDDHDMVIA TTYTHDLGMN LSEFTGFSET LAKMRNGSGY YADRVTREQD TGIFRKYAYY PTPDHRYLLE LGLNDAGFMA RRNVSFVKTA QQVQADNPSL VLVRTFNIYG EQIGDRTAKV DPGLNELLNQ VIANRSTLEV RDTTNATLTR FRFVDLKNPV YASDPSLVIE FVYTTRPLDE ALFRLTLEHL LIGLLALVLG ALFASGVSVL VVRPIRQIIG DVEAIANGNL NHPIGKVWMV EFDALRQSIH LMVDRLKEQV NQITQQNEVL EARVEMRTRQ LVQSNEEVHL YLDIMTHDIN NTLTVALASA EMLNDILPPG HPTEHKIKVN RITTAIQKSV GIIARVSMIS RVHDSDIPLG EISLDHEVLD AIGHYPDASI EYAETSLQVC ADQFLSEVFV NLLGNSLKFG GPDVRVRVAV EVDEEDVTIS VEDSGPGISD LVKPKVFGRF ARGEGHGTGS GLGLFIAASL VARYGGQIWA DDRVAGSPEL GAAIRFTLPR HCFEE
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