Gene Mpal_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2220 
Symbol 
ID7270306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2370806 
End bp2371762 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content58% 
IMG OID643570832 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_002467236 
Protein GI219852804 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0194342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCGA TTGAAGCTCT CTCACTGTCG AAAAGGTTCG GCGACCTCCA GGCATTATCG 
GCGATAGATT TCACTGTCGG GGAGGGGGAG ACCTTCGGAT TTTTGGGCCC GAACGGTGCC
GGCAAGACGA CCACGATCCG TATCCTGACA GGGATCACGG TACCCACGGA TGGGACGGCA
CGCATCTTCG GCAGCGATAT CGTGCAGGAT ACAATTGCAG CACGCCGGCA GATGGGGATC
GTCCACGAGA CCTCCAACAT CTATACCGAT CTCTCTGCAT GGCAGAACCT GATGTTCACA
GCTGAGCTCT ATCATGTCAG TCGGAAGGAC CGCGAGAAGC GGGGGATCGA TCTGCTCGAG
CTCTTCGGCC TCTCCGGGCG GCGGGATGAC AGGACAAGAG GGTTCTCCAA GGGCATGAAG
CGACGGCTGA CGCTCGCCAT GGGGCTGATC AATCATCCCC GTCTCCTCTT CCTCGATGAA
CCGACCTCTG GCCTGGATGT GCAGAGCAAC CTGATCATCA GAGACGTGAT CCGCGAACTG
AACGAACAGG GAGTGACGGT CTTTCTCACG ACCCACAACA TCGAGGAGGC CAACCTCACC
TGCGACCGGG TGGCGATCAT CAATCAGGGA CGGATTGCTG CCGTCGACAC CCCCGAGCGG
CTCAAAAAAA CGATTCAGAG CGTCCAGTCG ATCGAGATCG CCTTCGACCC GACATCCCCG
GTCAGATCCG GGAACCTCGA ACAGATCGCC CTCGTGAGCG AAGTCAGAAA AGAAGGGGAC
AAATTCCGGC TGATCACTGA GAACCCCCCC GCTGTGCTGG ACGAAGTCAT GGAGTATGCA
CACGAGCATC ATCTCCGGGT TATCAGCGTC AACACCCTCG GGCCCACCCT TGAGGATGTC
TTCATCCGAC TGACCGGACT GGACATCAGG ACAAAAGGGG TGAAGACCAT TGATTGA
 
Protein sequence
MYAIEALSLS KRFGDLQALS AIDFTVGEGE TFGFLGPNGA GKTTTIRILT GITVPTDGTA 
RIFGSDIVQD TIAARRQMGI VHETSNIYTD LSAWQNLMFT AELYHVSRKD REKRGIDLLE
LFGLSGRRDD RTRGFSKGMK RRLTLAMGLI NHPRLLFLDE PTSGLDVQSN LIIRDVIREL
NEQGVTVFLT THNIEEANLT CDRVAIINQG RIAAVDTPER LKKTIQSVQS IEIAFDPTSP
VRSGNLEQIA LVSEVRKEGD KFRLITENPP AVLDEVMEYA HEHHLRVISV NTLGPTLEDV
FIRLTGLDIR TKGVKTID