| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2213 |
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| Symbol | |
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| ID | 7270299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2360717 |
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| End bp | 2363926 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643570827 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002467231 |
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| Protein GI | 219852799 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3322] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.273979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC AGATGAAGAC AAATCTCATA CTGATTGTAT TGCTCGTGTT GGTGGTTGTG
GTGATCAGCA GTTTTATAAC TGTGATCTCT TTTTCCAGTT ACAGCGCCCT CGAACAGGAG
TATGTGGCCC AGGACATCCA TCAGGCGGTT AGCAGGGTCA ACGATGAAAT GACCACGCTC
TCCTCCATTG TCAGTGACTG GGCCCCCTGG GATGATACCT ATGCCTTCGT CAACGGGAAC
AAACCTGAGT ATCTTAAAAA AAACCTGATG CCCGAGTCGA CCATCTATGA AAACCTCCAA
TTAAACCTCA TCGTCATCAC CGACAGCCAG GGGGGTATTG TCTATGCTGG GTCCTATGAT
TCCAGGAACA ATACGATGGT TCCGGTCTCG GAATCTTTTA AACAGCAGAT TACATTACAG
AGTCCGCTCC TGAATATGTC GGATCCCCAT GGTGTGACGG CCGGGGTGCT GATGCTTGGA
GAGAACCCGA TGATTGTTGC ATCGCGCCCG ATCGTTCACA CGGATTTTTC AGGTATCCCA
AGTGGTGTGG TGATCATGGG ACGATATCTT GACCCTGCTG AAGTGTCATA TCTTGCCAGT
CTCACTCAAC CATCGCTCCA GTTCGTCAGG GTGAAGGACC CTACCCTTCC CCCTACCCTC
CTGTCTGAGC TGGAGGCCCG TGGTACCGAT GATACCCCGG TGATTCTTAC GTCAGGTCGG
ACTAATGTTT CGGGATACGC CCTGATCAAG GATATTTACG GCAACGATGC TCTTGTTCTC
CAGATCACCC AACCCCGTGA TATTTATCAG CAGGGGATTT CCACTACCAT CGAATATATC
CTGATTATTC TGGCGATCTG TCTTGCCTTT GGGGTGGCCA TTATCCTCAT CATCGACCAG
TTGGTACTCT CCCGGCTCAG TACCCTGAAC CAGCAGGTCC AGACGATCAG TAGGGGGACC
GATGCCTCAA AACGGGTAGA GCTCAGTGAT GATGATGAAT TTTTTCATCT CGCCGGTGGG
ATAAACCAGA TGCTGGAGAC TATCTACACA ACCCAGCAAC GGTTGCTGGT GAGTGAAACA
CGATTCCGTC AGTTCACCGA TTTGATCCCT CAAATTATCT TTGAACTGGA CATATCTGGT
AACCTGACCT ATCTCAACAA GTTCGGGATG GAGCTCACCG GCATGACCCC CGAAGATATT
GGTCCACTGA CCAGGAGTGG AACTTTTATC CTACCTGACG AACAAGATGA GTTGCTAGAA
AACCTTAAAT CCGGTTCAAA TACCCAAAAA TCATCTGGCA AAGTATATTC TTTGGTTAAA
AAAGATGGTA CCCGGATCAA AGCCATCATC TCCATTGCAC CGATAATCCT GAATGGTACC
TTGCAAGGGT TCCGGGGAAG TGCTTTCGAT ATTACCGATC GGATAGCGCT TGAGGATGCA
CTTTCTGAAA GCCAGAAATA CCTTAAGACG CTCCTCTGGT CTATTCAGGT GGGAATTATT
GTCATTGATG CAGATACTCA TATCATCATC GATGCTAACC CGGCTGCACT CAATATAATT
AAAATGACAA GGGAAGAACT CGTCAATTCC TCGTGTCATG AGAGTTTCTG CCCGGATGAG
GAGGGGAGAT GTCTGATAAC GGATCAGGGG AATTATCTGG ACAACGTCGA ACGGACACTT
CGTACCGGGG ATGGCCGCGT TCTCTCTATC ATCAAATCCG TCGTTCCCAT CATGCTGAAG
GGTAGAAACT GCCTGCTGGA AACGTTCATA GACAACACTG CAAGGAAACA GATAGAGGAG
GAACTCCGCC AGAGCACGGA TCTGATCACA GGGATTCTGC AGGCTTCACC GGTTGGGGTG
TGTCAGTTGG ATGCGCTTGG AAACATCATC TTTGTCAATG ACATGTTTTC AAAGATCACC
GGAATCCCCC TTGACCAGGT TAATGGGAGA TACTGGGCAG ATATCTTTCA GTCTGAGGAT
TGTAGTCCTC TGCTCCCCAC TATCGACACA GCGTGTCAGG AAATGCGGAT TTTGAAATCT
GAGATCCACT ATATCCACCC CGATGGATCA AAATACTGGT TAATCTGGCA GATAGTTCCT
CTCATCGATC ACACGAACCA GTTGACCGGC TGGCTGGGTA CATTTGCGGA TATCACCGAA
CGAAAGAAGG TTGAGGACGC ACTGATGGAG AGCGAGGAAA AGTACCGTGC CCTTATAGAG
AATACTCCTG ACCTTCTCTT TTCCGCTGAT CTGGATGGGA ATGTCACGTA TATCTCTCCC
CAGGTCAACC AGTACGGATA CCTTGAGGAG GATATCATTA GTCACCCTCT CTTCAATTTG
ATTCATCCGG AAGAGCGACT CCTTATCGCA GAAAAATTTC ATATCGAGTT GAATAAAAAT
GCCCGGTTCT TCTCCACCTT CCGGTTGCTT GACAAATGGG AGAATATCCA CTGGTTTGAA
GAGAAGAGTT TTCTGCAACT CAACACATTT GGAGAACCCA TTGGAAGTTA TGGGGTATTA
CGGGATGTTT CAGAACGGAG ACGGGCTGAA GATGCGATCG AGCTTGCCAA TAAAAAATTG
AACCTGATGA ATAACATCAC CAGGCATGAC ATCCTCAATA CCGTTACTGG CTTACTCGGG
TGTGTGGATA TGGCAAATGC GACCGATTCT GAAGATGAAC GCACCCTGTT ACTACAAGAT
ATTAAAAATC TTTCAAAAAC AATCCAGCGG CAGATTGCAT TCACCAAGGA ATACCAGGAA
GTCGGTGTCA ACCTGCCGAT ATGGCAGGAT GTCGGGGAGG TGCTGCAGGG TATACTGGTA
AACTTCGAAG GATCAGGCCT CCGATTCGTC ATAGACCTTG AACATGTTGA GATCTATGCG
GACCCGCTAT TGGAGAAGGT GTTCTACAAT CTTGTGGACA ATGCGATCCG GTATGGTGAG
AACATCACCA CGATACAGTT CTACCAGGTA AATTCTGATG ATGGTTTCTC ACTCATCTGC
GAAGATGACG GTGTCGGTAT ACCTGTTGAT ATGAAGGACT ATATCTTCGA ACGTGGTGTT
GGTAAAAATA CCGGGATGGG ACTGTTCCTC AGCCGGGAGA TCCTTGGCAT AACAAAGATT
GAGTTCCATG AAAATGGTAT TCCGGGGAAG GGAGCAAGGT TTGAGATGTA TATTTCACGG
GGGACATTCA GGTTTATCAC CGAATTTTAA
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| Protein sequence | MKLQMKTNLI LIVLLVLVVV VISSFITVIS FSSYSALEQE YVAQDIHQAV SRVNDEMTTL
SSIVSDWAPW DDTYAFVNGN KPEYLKKNLM PESTIYENLQ LNLIVITDSQ GGIVYAGSYD
SRNNTMVPVS ESFKQQITLQ SPLLNMSDPH GVTAGVLMLG ENPMIVASRP IVHTDFSGIP
SGVVIMGRYL DPAEVSYLAS LTQPSLQFVR VKDPTLPPTL LSELEARGTD DTPVILTSGR
TNVSGYALIK DIYGNDALVL QITQPRDIYQ QGISTTIEYI LIILAICLAF GVAIILIIDQ
LVLSRLSTLN QQVQTISRGT DASKRVELSD DDEFFHLAGG INQMLETIYT TQQRLLVSET
RFRQFTDLIP QIIFELDISG NLTYLNKFGM ELTGMTPEDI GPLTRSGTFI LPDEQDELLE
NLKSGSNTQK SSGKVYSLVK KDGTRIKAII SIAPIILNGT LQGFRGSAFD ITDRIALEDA
LSESQKYLKT LLWSIQVGII VIDADTHIII DANPAALNII KMTREELVNS SCHESFCPDE
EGRCLITDQG NYLDNVERTL RTGDGRVLSI IKSVVPIMLK GRNCLLETFI DNTARKQIEE
ELRQSTDLIT GILQASPVGV CQLDALGNII FVNDMFSKIT GIPLDQVNGR YWADIFQSED
CSPLLPTIDT ACQEMRILKS EIHYIHPDGS KYWLIWQIVP LIDHTNQLTG WLGTFADITE
RKKVEDALME SEEKYRALIE NTPDLLFSAD LDGNVTYISP QVNQYGYLEE DIISHPLFNL
IHPEERLLIA EKFHIELNKN ARFFSTFRLL DKWENIHWFE EKSFLQLNTF GEPIGSYGVL
RDVSERRRAE DAIELANKKL NLMNNITRHD ILNTVTGLLG CVDMANATDS EDERTLLLQD
IKNLSKTIQR QIAFTKEYQE VGVNLPIWQD VGEVLQGILV NFEGSGLRFV IDLEHVEIYA
DPLLEKVFYN LVDNAIRYGE NITTIQFYQV NSDDGFSLIC EDDGVGIPVD MKDYIFERGV
GKNTGMGLFL SREILGITKI EFHENGIPGK GARFEMYISR GTFRFITEF
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