| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2189 |
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| Symbol | |
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| ID | 7270274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2328056 |
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| End bp | 2329813 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643570803 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_002467208 |
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| Protein GI | 219852776 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.142127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT CCGATTATGT TATAGATTCT CTTGCAGAAC AGGGGATCAC CCATATCTTC
GAAGTTTGTG GGGGAGCGTT AGCGCATCTG CTCGATTCAT TATATGGGCG AACGGATATT
ACCACAGTCT CCATGCATCA TGAGATGGCT GCGGCCATCG CAGCTGAAGG ATATGCCCGG
GTGAGCGGAA AATTCGGGGT TGCGATGGCA ACCAGCGGTC CCGGTGCAAC GAATCTCATC
ACCGGCATTG GAAGCTGCTT CTTTGATTCA ATTCCCTGTC TATATATTAC CGGGCAGGTG
AACACCTATG AATATAAATT TGACAGACCG GTACGACAGA TCGGATTTCA GGAGACCGAC
ATAGTATCCA TTGTAAAACC CATTGTGAAA AAGGGAGTGC TGGTGCAGGA TGCAGATGGT
ATTCGCTCTA CACTGGAAGA GTTATATTCA CTCATGGTAG ATGGCCGTCC TGGGCCGGTC
CTTCTGGATA TCCCCTTGAA TATCCAGCGG GCTGCTATCG ATCCACCTTC TCTCAAGGGG
TATTCGAGGG GATCTCCGAA AGGGAACCCC TCAGAGGATA CTCTCGATCA GATCTGCAGT
AGCATCAAAG CTTCAACAAG ACCCGTCATT CTTGCGGGGG GTGGTGTGCG GTCCTCGCAT
GCAACTGAGG ATCTCATACG GTTTGCCCAT GTCACCGGAA TTCCAGTGGT TACATCTCTT
ATGGGACTGG ATGCCTTCCC TCATGAGGAT TCTCTGTTTA TCGGGATGAT CGGGACATAT
GGAAATCGTT ATGCAAATCT GGCAATTGCA AATGCAGATC TGGTCATTGC TCTCGGAACC
AGATTCGATA CTCGCCAGAC CGGAACCCGG CCGGAAACCT TTGCACGGAA GGCAACAATT
GTTCATGTCG ATATCGACCC GTTGGAATTG AATAGCAAGA TCAGGGAACA CTTCTCGGTC
CAAGCTGATG TCAGGCAATT TTTGGAACTG ATCACCGTTC ATCCTGATAT TTCAAAGATT
CCGACACCCT ATATCCCGTG GCTGGAGAAG ATCAATCAGT ATAAGCGGAG TTATCCGGAT
TTCAAAGAAC CCGCAACCTC TGCGATTGAC CCGAATTATT TCTTGCATCT GCTGTCAGAA
GACCTGATGG ACGATGCCAT AGTCTGTGTG GATGTCGGGC AGATTCAGAT GTGGGCCGCC
CAGAGTCTTG TGATCAGAGG AGCGCAACGG TTTTTAACTG AGGGGGGCAT GGCCTCGATC
GGTTCTGCTT TGCCGATGGC GATTGGTGCT GCCTTTGCAG GACCGAAGCG GCAGATCATC
GTCATCACTG GTGACGGGGG ATTCCAACTG AACATTCAGG AGCTCCAGAC CGTCTATCAT
CACCACCTTC CCATCAAGAT CATTCTGTTG AATAACAACG GGTACGGGAT GATCAAACAA
TTCCAGGAAC AATATCTCGA CAGCAAGTTC CAATCATCAG GTATTGGGTA TAGCAACCCT
GATTTTTTGG ATGTGGTACG TGCGTATAAG ATTCCATCGA TGCAGATCTC ATCCAATGAT
GAGATTGATC ATGCACTGCG CAATTCCTTA TCTGATATGC ACCCCGGTTT TCTGGAGGTA
CGTATCGATG AGAGGTCCCG TGCCCTTCCA AAACTGGCTG TCAATCGGCC TGTTGAAGAT
CAGGAGCCCC TGCTATCAAG AGAGGAACTG AGATCGAAGA TGCTCATTGA AATACTGCCG
GAGCCAGAAA AATTATGA
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| Protein sequence | MKLSDYVIDS LAEQGITHIF EVCGGALAHL LDSLYGRTDI TTVSMHHEMA AAIAAEGYAR
VSGKFGVAMA TSGPGATNLI TGIGSCFFDS IPCLYITGQV NTYEYKFDRP VRQIGFQETD
IVSIVKPIVK KGVLVQDADG IRSTLEELYS LMVDGRPGPV LLDIPLNIQR AAIDPPSLKG
YSRGSPKGNP SEDTLDQICS SIKASTRPVI LAGGGVRSSH ATEDLIRFAH VTGIPVVTSL
MGLDAFPHED SLFIGMIGTY GNRYANLAIA NADLVIALGT RFDTRQTGTR PETFARKATI
VHVDIDPLEL NSKIREHFSV QADVRQFLEL ITVHPDISKI PTPYIPWLEK INQYKRSYPD
FKEPATSAID PNYFLHLLSE DLMDDAIVCV DVGQIQMWAA QSLVIRGAQR FLTEGGMASI
GSALPMAIGA AFAGPKRQII VITGDGGFQL NIQELQTVYH HHLPIKIILL NNNGYGMIKQ
FQEQYLDSKF QSSGIGYSNP DFLDVVRAYK IPSMQISSND EIDHALRNSL SDMHPGFLEV
RIDERSRALP KLAVNRPVED QEPLLSREEL RSKMLIEILP EPEKL
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