Gene Mpal_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2179 
Symbol 
ID7270264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2317929 
End bp2318474 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID643570794 
Producttransposase IS4 family protein 
Protein accessionYP_002467199 
Protein GI219852767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.488583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTC ACAGCTCGAT CTCTCCTGTT GTTCGATCGA TACTACCACG ATCCCCGGAA 
AAAAGGGGAT TGTTAAGATT TGAAGGACTG GATCGAATTC AAGGCAGCAA AATGAGTGTT
CTCGTAGAAC GGCACGGTAG ACTGCTCGCC TGCATCATTG CTCCAGCGAA CGTGCATGAT
GCAATGACGT ATCATCCGAC GTTGACGGTG TTTAAAATTC AAAGGCCGAT AGGAAGGCCG
ATCATACGAC CACAGGAGAT TCTCGTAGAT GCAGCGTATT ATACCCTCGC AATAAGAACA
ATCAATCGCA GAAGGGGAAT TAAGACAATG ATCCCAGTCA ATCGGAGAAA TCATAGGCGA
CCAAAAAGGG GACGATCGTA TCAATTCGAT CCCATAATCT ACCGTTCTCG AAGAGCAGTT
GAACGATTCT TTAGCTGGGT CAAGGCATTC AGAAAAATCT CACCCAGATA TGAGCGGCTC
GAAGAATCAT TTCGAGGACT GGTCATCATC GCCTGCATAC TGATACTATG GAGACTTTTG
GGATGA
 
Protein sequence
MISHSSISPV VRSILPRSPE KRGLLRFEGL DRIQGSKMSV LVERHGRLLA CIIAPANVHD 
AMTYHPTLTV FKIQRPIGRP IIRPQEILVD AAYYTLAIRT INRRRGIKTM IPVNRRNHRR
PKRGRSYQFD PIIYRSRRAV ERFFSWVKAF RKISPRYERL EESFRGLVII ACILILWRLL
G