| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2168 |
|---|
| Symbol | |
|---|
| ID | 7270253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2304269 |
|---|
| End bp | 2305432 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643570784 |
|---|
| Product | Nucleotidyl transferase |
|---|
| Protein accession | YP_002467189 |
|---|
| Protein GI | 219852757 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAG GAGAGGGGAC CCGCCTCCGT CCACTCACGT TTGAGCGTCC AAAGCCATGT
ATACCCATCG TCAATCGACC CTCGATACAG CACCTCGTCT CGCACCTCTC CAACCTCGGT
TTCAACGAGG TGGTGATCAC CCTCGGGTAC ATGGGGTCGT CCATCGAGGA GGCTCTCGGC
GATGGTTCCC TTTATGGCGT GGACATCACC TATGTCCATG AGAAGGTGAA GATGGGAACT
GCAGGAAGCG TAAAGAACGC CCAAGAGTAC CTGGACGGGC AACCATTCCT TGTGGTCGGA
GGGGATCATG TCACCGATCT AAACGTCCTC GAGTTCTACC GCGAACACCG TCGTGGTAAC
CATATCGCCA CCATCGGGCT GATCAGCATC GATGACCCCT CTGAGTACGG GATCGCAGAG
ATCGATGTCA GTTACGAGAT CAAACGATTC AAAGAGAAGC CGGCGCCAGG GGAGATCTTC
AGCAACCTGG CCTCGACCGG GATGTACATC TTCAACCCCG AGGTCTTCGA CCACATCCCA
GCCGGCACCA AGTACGACTT CGCCCGCGAC CTCTTCCCTG CCCTGATGAA TGAAGGGCAT
GTTCTGAAGG GCTGGCTCGC CCGGGGCAAC TGGACCGATG TCGGGAGTCC CAGTTCGTTG
CGGGTCGCCG AACGGTGGAA ATTGCAGGAG ATGTCAGCCA CCAACATCAG CGGCAATCTG
GCGATGAAGG GAGCCCATGT CCTCGGACCG GTCCAGCTCG GGGACTCGAT CTCGCTCGGT
TCCAACACCC GGGTGATCGG GCCGGTTGCG ATCGGGGCCG GGACGATCAT CGAGAAGGAT
GTGCTGATCG GTCCGTACAC CTCGATCGGC GAGGACTGTC ATATCAAGGC CAACGCCAAG
ATCTTCTCTT CCTCCCTGTA CAACCGGATC GTCGTCGGGA AGAACAGCAC GGTCAGCGGT
TCGATCATCG ACAATGACAC CGTGATTCGG GAGGACTGCA GCATCGAGAA CGACACCGTC
ATCGGTCCGC GGGTGATGAT CCAGCGCGGG GTCGTGATCC ACTCCAAGAC CCGGCTCTGG
CCGGAGACCG TCATCCCCGA GGGGACGATC GTCAAAGAAC ATGTGCTGAA TAAAAAGTTT
GATCCCCGGT GCGAAGGATC CTAG
|
|---|
| Protein sequence | MCGGEGTRLR PLTFERPKPC IPIVNRPSIQ HLVSHLSNLG FNEVVITLGY MGSSIEEALG
DGSLYGVDIT YVHEKVKMGT AGSVKNAQEY LDGQPFLVVG GDHVTDLNVL EFYREHRRGN
HIATIGLISI DDPSEYGIAE IDVSYEIKRF KEKPAPGEIF SNLASTGMYI FNPEVFDHIP
AGTKYDFARD LFPALMNEGH VLKGWLARGN WTDVGSPSSL RVAERWKLQE MSATNISGNL
AMKGAHVLGP VQLGDSISLG SNTRVIGPVA IGAGTIIEKD VLIGPYTSIG EDCHIKANAK
IFSSSLYNRI VVGKNSTVSG SIIDNDTVIR EDCSIENDTV IGPRVMIQRG VVIHSKTRLW
PETVIPEGTI VKEHVLNKKF DPRCEGS
|
|---|
| |