Gene Mpal_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2163 
Symbol 
ID7270248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2298352 
End bp2298642 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content53% 
IMG OID643570779 
Product50S ribosomal protein L30e 
Protein accessionYP_002467184 
Protein GI219852752 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1911] Ribosomal protein L30E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0171744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTA ATGCTTCACT CAGAAAGGCC ATCAAGACAG GCGATGTCCT GCTCGGCCAG 
AACTCTACAG CAGAATGTAT CAAGGATGGA AAAGCCCAGA TGATCGTCGT CGCAGCAAAC
TGCCCGTCCA CCTATCGGAC CATGCTGGAC GAACAGAACG ATGTCTACGT CCACACCTAT
GAAGGATCGA GCATGCAGCT CGGAAAGGCA TGCGGAAAGC CGTTCATGGT CAGCGCACTC
GCCATCGTCA ATGCCGGCGA GTCGGATATC ATCAGTCTCA AGAGGGCGTA A
 
Protein sequence
MDFNASLRKA IKTGDVLLGQ NSTAECIKDG KAQMIVVAAN CPSTYRTMLD EQNDVYVHTY 
EGSSMQLGKA CGKPFMVSAL AIVNAGESDI ISLKRA