| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2162 |
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| Symbol | |
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| ID | 7270247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2297175 |
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| End bp | 2298362 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643570778 |
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| Product | DNA-directed RNA polymerase, subunit A'' |
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| Protein accession | YP_002467183 |
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| Protein GI | 219852751 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0581586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACCAC CGGAAATGGA ATCTGCCATC GATGCAGCGG CGCTCCCTGA TCTAACCAAG
AAACAGATTA GAGACACCCT GGATGGGAAA ACAGTCACCG AGGAGGAGTT TGCAAAAATT
CTGAGACTCG TCGAAGGTGA GTTCAAGAGC ACCAGAATCG AACCGCTCGA AGCGGTCGGT
GTGATCGCTG CCCAGTCGAT CGGTGAACCG GGTACGCAGA TGACGATGCG TACCTTCCAC
TACGCAGGGG TGGCTGAGAT CAACGTGACG CTCGGTCTGC CTCGTCTGAT AGAGATCATG
GACGCCCGGC GCGAACCCTC AACGCCGACG ATGACCGTCC ACCTCTCAGA CGAATACAAC
AACGACCGTG ACAAGGCCAG GATGGTCTCC TGGCAGATCG AAGCCGCACC CCTGCATGAG
TTCGGGGACA TCATCACCGA CATGGAGAAC ATGCAGGTGC TGGTCAAGCT GAACAAGGCG
GTCTGCGAAA AGCGAAAGAT CTCAGTCGAT GTGGTCAGCG AGACTGCACC CCGGAAGATC
CGGGAACGGC GGCATTACCG CGACTTCGAG GCAGAGGCGA ATATCGATGA AGCGATCATC
ACCTTCACCC CCAAGGATCG TGAGAGTTAT CAGAACCTCT TCCAACTCGC AGAACACGTT
CGGAACGTGA TCGTGCAGGG GATTGATGAT ATCGAGCGTG TCGTGGTCAG AAAAGAGAGC
GGAGAGTATA TACTTTATAC TGAAGGCTCC AACCTTAAGG ATGTCTTTGA GGTTGCTGGC
GTCGACACCT CCCGGACCCG AACCAACAAC ATCAGCGAGA TCTCGCAGGT GCTTGGCATT
GAAGCGGCCA GGAATGCGAT CATCGCTGAA GCTCTCAGCA CGCTGGGAGA ACAGGGTATC
AGGGTCGATG TACGGCATAT CATGCTGGTC TCAGATATGA TGTGCATGGA TGGGGAAGTC
AAGCAGATCG GCCGTCACGG TATCGCAGGT GAGAAGGAGA GTGTCCTCTC AAGGGCCGCC
TTTGAGGTGA CCGTGAACCA TCTTCTCGAC GCAGCAGTCG CAAACGAAGT TGATGAACTG
AACGGTGTTA CAGAGAACGT GATTGTGGGC CAGCCGATCC AGCTCGGAAC CGGAGATGTC
AAATTAATTG CAAGGCCCAG AAACCAGGAG AATTCTAATG GATTTTAA
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| Protein sequence | MLPPEMESAI DAAALPDLTK KQIRDTLDGK TVTEEEFAKI LRLVEGEFKS TRIEPLEAVG
VIAAQSIGEP GTQMTMRTFH YAGVAEINVT LGLPRLIEIM DARREPSTPT MTVHLSDEYN
NDRDKARMVS WQIEAAPLHE FGDIITDMEN MQVLVKLNKA VCEKRKISVD VVSETAPRKI
RERRHYRDFE AEANIDEAII TFTPKDRESY QNLFQLAEHV RNVIVQGIDD IERVVVRKES
GEYILYTEGS NLKDVFEVAG VDTSRTRTNN ISEISQVLGI EAARNAIIAE ALSTLGEQGI
RVDVRHIMLV SDMMCMDGEV KQIGRHGIAG EKESVLSRAA FEVTVNHLLD AAVANEVDEL
NGVTENVIVG QPIQLGTGDV KLIARPRNQE NSNGF
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