| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2146 |
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| Symbol | |
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| ID | 7271626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2280173 |
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| End bp | 2281138 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643570760 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_002467167 |
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| Protein GI | 219852735 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA TCGCCGTCGT TGAAGGGGAT GGGATCGGCA GGGAGGTGGT CCCGGCCGCC
GTCACCGTCC TCTCCACGAT CAATCCGGAC TGGGAGTGGG TGCCGGTCGA GGTCGGATAT
GCCCGGTGGC AGAGGACCGG CTCATCCCTG ACCTCCAGTG ACCTCGCCGT GATGAAGGAG
GTCGACGCCG TCCTCTTCGG CGCGATCACC ACGCCGCCGG GAGGGGAGTA TCCGAGCGTG
ATCCTGCAGA TCAGAAAGGC GCTCGACCTG TACGCCAACA TCCGACCGGT CAGGGCTCCG
GGGGTCGACC TGGTGACGGT CCGCGAGAAC ACCGAGGGGC TCTACTCTGG GATCGAATGG
GAGGAGGAGG ACCGGGCCTG CTCGGTCAGG GTCGTCTCAA AGAAGGGGAC ACGCAGGATC
GCGGCCCGTG CAGCCACCCT GGCCAGGGAA CGAAACGGGC ACCTGACGAT CGGCCATAAG
GCCAATGTGC TCAGGTCGGA CCAGCTCTTC CTCTCTCTCT GCACGGCTGT GGCTGATGAG
TACCAGATCC CGCACACGAC CAGGTTGATC GATGCGCTCT GTCTCGACGT CCTCCTCCAT
CCCGAGGCCT ACGATGTGAT CGTCACCACC AACCTCTTCG GGGACATCCT CAGCGATGTG
ACCGGGTACC TGGCCGGCGG GCTCGGGATG CTTCCGAGTG CAAATCTCGG GGACCGGCAC
GCCCTCTTCG AACCGGTTCA TGGGAGCGCA CCGGATATCG CCGGCACCGG CAGAGCGAAC
CCGATCGCTG CGATAGAGAG CGGGGCGATG ATGCTGAATC ATCTCGGTTA CCCGGAGCAG
GCCGATCTGA TCGAGGCTGC GATTCAGGCG GTGATGCTGG CCGGCATCAA AACCCCTGAT
ATTGGGGGAA GTGCAGATAC CAGGACCGTC ACCCGGGCGA TCTGTCGTGC GCTACAATCT
CCCTGA
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| Protein sequence | MTTIAVVEGD GIGREVVPAA VTVLSTINPD WEWVPVEVGY ARWQRTGSSL TSSDLAVMKE
VDAVLFGAIT TPPGGEYPSV ILQIRKALDL YANIRPVRAP GVDLVTVREN TEGLYSGIEW
EEEDRACSVR VVSKKGTRRI AARAATLARE RNGHLTIGHK ANVLRSDQLF LSLCTAVADE
YQIPHTTRLI DALCLDVLLH PEAYDVIVTT NLFGDILSDV TGYLAGGLGM LPSANLGDRH
ALFEPVHGSA PDIAGTGRAN PIAAIESGAM MLNHLGYPEQ ADLIEAAIQA VMLAGIKTPD
IGGSADTRTV TRAICRALQS P
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