Gene Mpal_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2144 
Symbol 
ID7271624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2278906 
End bp2279376 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID643570758 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_002467165 
Protein GI219852733 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTG AAGGCCCGGC GGTCTGCGTC GGACGCGACA TCGATACCGA CCTGATCATC 
GCCGGCCGAT ACCTCCGGAC CACCGAACGA TCGATCTGGG CCGCCCACAC CTTCGAGGAC
CTGGACCCGG CCATGGCCGG CCGGTTGAAA GGGGCTGTGA TCGTCGCCGG AGAGAACTTC
GGGTGCGGGT CGTCACGGGA GCAGGCCCCG GTGGCCCTGA AAATGGCCGG GGTCGTTGGC
ATCGTCGCAC CCTCCTTCGC CAGGATCTTC TTCCGGAACG CCATCAACAT CGGCCTGCCC
CTGATCGAAG CAGACCTCAG GTGCGTCGAC GGAGAGACGG TCACCTTCGA CCTCGCTGAG
GGGGTCGTCA CCGTAGGAGA ACGAACGATC AGCGTCACCC CCCTCTCCTC CCACATGCAG
GCGATCCTCG ATGCCGGCGG GCTGGTCGCC TTCTGGAAGG AACGGCGATG A
 
Protein sequence
MKGEGPAVCV GRDIDTDLII AGRYLRTTER SIWAAHTFED LDPAMAGRLK GAVIVAGENF 
GCGSSREQAP VALKMAGVVG IVAPSFARIF FRNAINIGLP LIEADLRCVD GETVTFDLAE
GVVTVGERTI SVTPLSSHMQ AILDAGGLVA FWKERR