| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2142 |
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| Symbol | aksA |
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| ID | 7271622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2276553 |
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| End bp | 2277686 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643570756 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_002467163 |
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| Protein GI | 219852731 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCAG AACGATGGAA TGTTGAGATC TGTGATGTAA CCCTGCGGGA TGGCGAACAG
ACCCCCGGGA TATCATTCAC CTGTGATGAG AAGATGAAGA TCGCCGGGAT GCTCGATCAG
GTCGGAGTCG ACGTGATTGA GGCAGGGTTC CCCACCGTCT CTCCAGAGGA GAAGCGGTGC
GTGACCGCTA TCAGCAGGAT GGACCTGGAT GCCCGGATCT GTTGCCTGGC CCGTGCCCGA
CCGGAGGATG TCGAGGCCGC AGCCGCCGCT GAGGTGGACA TGGTCTCCCT CTTCATCGCA
ACCTCCGACC TGCACATAAA ACATAAGTAC AAAAAACCGC GTGAGGTAGT GTTGGCCGGG
GCCCTCGATA TGATCGACCT GGCCCGCGAC CACGGTCTGG CGGTCCGATT CGCAGCAGAG
GACGCTTCAC GGACAGACCC GGCGTTCTTG AAGGAGGTGT ACCGGGCAGG GGGAGATCAT
GGCGCGGACC TCGTCTCGTT CGCCGACACC GTCGGTTGCC TGACTCCGCT TGAGATGTAC
GCCGTGATGA GCGACCTCTG CAGCACCGTC AGTGTCCCGC TCTGCGCCCA CTGCCATAAC
GACATGGGGT GTGCGACGGC CAACACGATC ACGGCCGCCG CTGCGGGAGC ATTCCAACTT
CACACCACCG TCAATGGGAT TGGGGAGCGG GCCGGCAATG CCTCCCTCGA GGAGGTGCTG
GTGCTACTCA ACCTGAAAGG GGGAGTCGTC CGGTACGACC TCTCGCACCT GGGCGAACTC
TCGGCACAGG TCTCGACCTC CTCCGGGCTG CCAGTCCCAA GAAACAAACC CGTGGTCGGG
GACCTGGTCT TCTCCCATGA GAGCGGGATC CATATCGCCG CGATGCTCGA GGACCCTGCA
ACCTATGAGT ATCTGCCTCC GGCCCTGGTC GGCCGGGAGC GGCAGTTCAT CCTCGGCAAA
CATTCAGGCA CCAAAGCACT CCGATACATC ACGGCCTCCC TCGGTCACCC GCTGACCGAT
CCGCAGATCG CACGGATGCT GACCCTGATC AAGGAGCGGA GCGAACATAA GTGCAGTATC
ACCCCCACGG TGCTGAAGGA ACTGATTCAT CTGGTTGAGG AAGGGAGGGG CTGA
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| Protein sequence | MFPERWNVEI CDVTLRDGEQ TPGISFTCDE KMKIAGMLDQ VGVDVIEAGF PTVSPEEKRC
VTAISRMDLD ARICCLARAR PEDVEAAAAA EVDMVSLFIA TSDLHIKHKY KKPREVVLAG
ALDMIDLARD HGLAVRFAAE DASRTDPAFL KEVYRAGGDH GADLVSFADT VGCLTPLEMY
AVMSDLCSTV SVPLCAHCHN DMGCATANTI TAAAAGAFQL HTTVNGIGER AGNASLEEVL
VLLNLKGGVV RYDLSHLGEL SAQVSTSSGL PVPRNKPVVG DLVFSHESGI HIAAMLEDPA
TYEYLPPALV GRERQFILGK HSGTKALRYI TASLGHPLTD PQIARMLTLI KERSEHKCSI
TPTVLKELIH LVEEGRG
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