| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2139 |
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| Symbol | |
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| ID | 7271619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2273566 |
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| End bp | 2274459 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643570753 |
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| Product | methanogenesis marker protein 11 |
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| Protein accession | YP_002467160 |
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| Protein GI | 219852728 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
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| TIGRFAM ID | [TIGR03280] putative methanogenesis marker protein 11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0431917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACA TCTCTGACCC GTACACGACG ACCTACGCGA AGATCGCGGC GGTCACCGAT
CCGACCACCA ATCAGGTCGA ATTGATCGAG TTCTTCGACT GCATCGGTGG GGCAATGTGG
TGTGGCCACC ATTATACCCA GAGCCCGCTC GTCACCTCGA CCAGGGTCGT CGGGTCCACG
ATGCGATACC TCCTCAAAGA GGGAAAGGTC ACGCTCGACC TGGTGGGATC GCGGTTCCCG
GCAGGGATCT CAGAGGTCGC GGTCGCCGGC GAGGAGGTCG GGATCACCTA TATCGGCATG
GGTGGTGGCG GTGTCGGCGC GGCCTGTGCA CGATCGAACG CAGCAGGCGT GATCAGGAGC
AGGAGCGACC CGGCCGGCGG AGGAAAGGTC GCGAGTGCGA CGATCTGGGT GCCGGCCCGA
CAGCGGGTAC TGATCGGTGT CGATGACACC GATACCCCTG AGGCCGGGGC CACCTGGACC
CTCGCCCATA ACATCGCAAA GGAGGTCGAA GACAGAGAGT CCATATACCT CTCCCATACG
ATCGTCCAGC TCTTTCCGGT CCCGTTCCGG ACCAAGAACT GCGTCGGGCT GGTCTGTGAG
TTCGCGACCA CCGACCCTGC AGGGCTGACC AGCCGGTTCA AAGCACTGGT CGAAGAGTAC
ACTCTCTCCG ACGAGACCGG GATGGCCGTC TTCACCGGAT TCGATCCCGC CCCACTCAGG
CCGTTTGGTG AACAGGTGAA ACGCGGCCAG GTCAGTTGGG ACGATCTGCA ACAGATCAAG
GATGAACGGT TGAAGATCGT CCTGAACGGA CGGGGGGCGA TCGGTGCGGT GGCGGCGATC
CCATTCTCAA CGAGATATGA GGAGGCGCTC GAACTATGGA ATGGACACGG CTGA
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| Protein sequence | MANISDPYTT TYAKIAAVTD PTTNQVELIE FFDCIGGAMW CGHHYTQSPL VTSTRVVGST
MRYLLKEGKV TLDLVGSRFP AGISEVAVAG EEVGITYIGM GGGGVGAACA RSNAAGVIRS
RSDPAGGGKV ASATIWVPAR QRVLIGVDDT DTPEAGATWT LAHNIAKEVE DRESIYLSHT
IVQLFPVPFR TKNCVGLVCE FATTDPAGLT SRFKALVEEY TLSDETGMAV FTGFDPAPLR
PFGEQVKRGQ VSWDDLQQIK DERLKIVLNG RGAIGAVAAI PFSTRYEEAL ELWNGHG
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