| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2138 |
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| Symbol | |
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| ID | 7271618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2272626 |
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| End bp | 2273582 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643570752 |
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| Product | hypothetical protein |
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| Protein accession | YP_002467159 |
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| Protein GI | 219852727 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
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| TIGRFAM ID | [TIGR03280] putative methanogenesis marker protein 11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00938098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAACCT ATACACCAGA ACAGGTGAGA GAGCGTTTTG GACCGCTCTT CTCAAAGAAG
TTCCTTGTGA TGGTCGACGA ACTGGCCGGC ATGGCTGAGA TCTTGGAGCA GTGTCGGTCC
AGAGGTACCA TCGAGTGGGA TGCGATGAAC AGATCCAGAG CCGGGGGTGC CGTCATCACC
TGTGCCGTCG AAGGAGCGGC GATGACAATC CATGCCAGGA TAGGCATCTA TCCAGTGAAC
TTCGGTTCTG CTGGAGACGC CATCGGCGGG CAGGCCCTGG AGGGTGTGGA AGTGAACGAT
AATGAGGTCG TCACGATCTG GCGAGGGATC GCCGGCGCCG GCGTCGGGAT CGCTGCCTGC
CTCCCCCAGG CCCCGGGCGT GATTCGAGCG GAATACCCGG AAGAGGAGGA CCTCCATGTC
GGCGGGGCCC GGATCAACCA TGTCCGGATC GTCTCCCCCC GGTACGAGAA GATCACAATC
GGGATCGACG ACACCGACAC TAAAACTGAA GGTGCCACCT GGGTGATGGC CCTTCAGTGT
GCCGAGGCCT GTTCCATCCC AGGGGTCGAA TTCCTGAACA TGCGGCTGAT TCAGTTGAAC
CCGGACGTCC CGAACAAGAC CACCAACTGC GTCGGTTCCG CCCTGAACTT TGCGGTCCTC
CCCGGGAAGG TAGAGGCCCT CCTCGAGTTT GTCAGGGAGT ATGTGCTGGC CCACACGCAC
AGTGATGAGG CTGGGATCGC CTGCTACTCA GGCATAATTT TGCCTGATCA TGACGATCTT
GCAGCCCGCG TGAAGACCGA GATCCTGACG GTCGATCAGG CGACAGCCGG GGCAGAGGTA
TGTGGGATCC GATTCCTCAT ACCCGCCCCA ACAAAGGGAC GCATCGGGGC CCTCGGCGCA
GTTCTCTGGG CAAACAAAGG CGTGGAGGCG GCAGGGCTCT ATGGCGAACA TCTCTGA
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| Protein sequence | MITYTPEQVR ERFGPLFSKK FLVMVDELAG MAEILEQCRS RGTIEWDAMN RSRAGGAVIT
CAVEGAAMTI HARIGIYPVN FGSAGDAIGG QALEGVEVND NEVVTIWRGI AGAGVGIAAC
LPQAPGVIRA EYPEEEDLHV GGARINHVRI VSPRYEKITI GIDDTDTKTE GATWVMALQC
AEACSIPGVE FLNMRLIQLN PDVPNKTTNC VGSALNFAVL PGKVEALLEF VREYVLAHTH
SDEAGIACYS GIILPDHDDL AARVKTEILT VDQATAGAEV CGIRFLIPAP TKGRIGALGA
VLWANKGVEA AGLYGEHL
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