| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2129 |
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| Symbol | |
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| ID | 7271609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2261053 |
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| End bp | 2262096 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643570743 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_002467150 |
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| Protein GI | 219852718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.444073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTG CATTGATAAC GGGAATTACA GGACAGGACG GGTCATACCT CGCCGAGTTG
CTGCTCAGCA AGGGATACGA GGTGCATGGA ATCATCAGAA GGGCCTCGAC CTTCAACACA
GGTAGAATTG ATCATATCTA CACCGATCTC CACGACGCCG AGACAAAACT CTTTCTCCAT
TACGGGGATC TCTCAGATTC CGAACAGATC AACAACATCA TGTACAATCT CAAGCCCGAC
GAGGTCTATC ATCTCGGAGC GCAGAGCCAT GTCCGGGTCA GCTTCGACAC CCCTGAGTAC
ACCGGGAATG TGACTGGCCT TGGGACTGCC AGAATCCTCG AGGCGGTCAG GCGGTCCAAC
AACAATGTCC GGTTCTACCA GGCCTCGTCC AGTGAACTCT TCGGTTCGTC TGCACCCCCA
CAGTCCGAGA CGACACCATT CCAGCCCCGC AGCCCGTACG CCTGTGCCAA ACTGTATGCC
TACTGGATGA CCCGGAACTA CCGGGACGGG TACAACATCT TCGCCAGCAA CGGGATCCTC
TTCAACCACG AGTCTCCCCG CCGGGGCGGC ACCTTCGTGA CCCGGAAGAT CACGCGGGCC
ATCGCCAGGA TTCGGGCGAA GAAGGAGGAG TTTCTCTACC TGGGGAACCT CGAAGCACGG
CGTGACTGGG GTTTTTCTCC AGAGTACGTC GAGGCGATGT GGCGGATCCT GCAGCAGGAC
CGTGCCGATG ATTTCGTAAT GGGAACCGGA ACATCCTACT CGGTACAGGA TTTCCTCGAT
GAATCCTTTG CCTATGCCGG GTTGAAGGTC GAGGAGCATG TGAAGATCGA TCCCCGATAC
TTCCGGCCGA CCGAGGTGGA GTCGCTGATC GCTGACCCGA CCAAAGCGAA GAAGGAACTG
AACTGGGCTC CGAAGATCAC CTTCACCGAC CTGGTCAGGA TCATGGTCGA TGCCGATATG
CGGGCGGCTG GCCTCGAACC GATCGGCGAG GGGGATGCAA TTCTCGCGGA GAAGTTCCCG
AATCGGTGGT GGAGAGGGGA TTGA
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| Protein sequence | MKTALITGIT GQDGSYLAEL LLSKGYEVHG IIRRASTFNT GRIDHIYTDL HDAETKLFLH
YGDLSDSEQI NNIMYNLKPD EVYHLGAQSH VRVSFDTPEY TGNVTGLGTA RILEAVRRSN
NNVRFYQASS SELFGSSAPP QSETTPFQPR SPYACAKLYA YWMTRNYRDG YNIFASNGIL
FNHESPRRGG TFVTRKITRA IARIRAKKEE FLYLGNLEAR RDWGFSPEYV EAMWRILQQD
RADDFVMGTG TSYSVQDFLD ESFAYAGLKV EEHVKIDPRY FRPTEVESLI ADPTKAKKEL
NWAPKITFTD LVRIMVDADM RAAGLEPIGE GDAILAEKFP NRWWRGD
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