| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2122 |
|---|
| Symbol | |
|---|
| ID | 7271602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2253701 |
|---|
| End bp | 2254135 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643570736 |
|---|
| Product | amino acid-binding ACT domain protein |
|---|
| Protein accession | YP_002467143 |
|---|
| Protein GI | 219852711 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4747] ACT domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGA AGCAGTATAT CATCAGGCAG ATCTCGATCT TTTCAGAGAA CCGACCGGGC
AGACTGGCAG CGATTGCCCA TGCCCTTGAA GAGGAGAAGG TGAACATCTT CGCCTTCAGC
ATCGCCGAGG CGAACGGCTT TGGGGTGGTG CGGGCGCTGG TCGATCATCC TGACCGTGCC
TTCACCCGGC TGACCGATCT CGGCTTCAAT GTCGCGTTCA CCGAGGTGAT CGCGGTCGCG
ATGCGGGACG AGCCCGGCGG TCTCTTTGAT ATCGCGACCC TGCTCGGGGA TGCCGGGATC
AATATCGAGT ACTCCTACGC ATACAGTGGT AAGGACGGAG CAGTCCTGAT CCTCAGGGTC
GATCAGGTGG AGCAGGCGAT CGAGGCAGTT CTCGCTGGAA AAAAGGAGTT ACTCCAGGCG
AAAGCCTTCT CCTGA
|
|---|
| Protein sequence | MDQKQYIIRQ ISIFSENRPG RLAAIAHALE EEKVNIFAFS IAEANGFGVV RALVDHPDRA
FTRLTDLGFN VAFTEVIAVA MRDEPGGLFD IATLLGDAGI NIEYSYAYSG KDGAVLILRV
DQVEQAIEAV LAGKKELLQA KAFS
|
|---|
| |