| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2113 |
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| Symbol | |
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| ID | 7271593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2243303 |
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| End bp | 2245597 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570727 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002467134 |
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| Protein GI | 219852702 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTGC GCAGCCTGAA CCTGACCATC TGGATATTGC TGGGTTTTAT CCTCGGAGCG
CTCGCTGGTC TGTTCTTTGG GGATCTCTGC TCGGTTCTGA AACCATTCAG CGATGCATTC
ATCAAGATCT GGCAGATCAC CATCCTCCCT TCCGTGGTGC TCTCCCTTAT CGTCGGAATC
GGGAGCCTGA AGAGGGACAG TGCACGGGCG ATCGCCGTGA AAGCGGGATT GGTCCTGCTC
CTGTTCTGGG CTATCGGTGT CGGGATATTT TTTTCATTTC AATGGGCGTT CCCTCCTCGG
GAGGCTGCCT CATTCTTCAG CGCACAGGAC CTGACCGAGA CGGTCGGTTT CAACATCATC
GACCAGTTCA TACCCTCCAA CCCCTTCCAG TCATTGTCAG AGGGGATAAT CCCGGCCACT
GTGCTCTTCT GCCTGTTCCT GGGCTTCGCC CTGATGATGG ATGATGGGAG CGGACCTATC
CTGAGTTCGC TCAGGATCCT GCTGGGCGCG CTCACACGCA TGACGAGCAT CCTGTCCCGG
ACCTTTCCCA TCGGTGTCTT CGTCATCACC GCCAGCACGG CAGGAACCAT GACCTTTGAG
GGTTTTCTGG ATCTTCAGGT CTACCTGGTC TCCCTTGCCG CGGCCACTGT CCTGCTCGGC
CTCGTTGTCC TGCCCCTGCT GATCACCTGT TTCACCACCT TCCGCTATCG GGACATCCTC
GCCGCCTCGT CCAGAGCTGT GGTTCTTGCA TTCTCGACCG GCAGTGAGTT CATCACCCTG
CCGCTGATCA TCGAAGGTGT CAGGAAACTC TTCGAGGGGC CGTCGGGGAT TCCTGTAAGC
AGCGGTGCGG GTGGGAATGC GGACCGGCCT GATGACCTTC CCCAAGAGGA CTGGACTGGG
GAGATGCAGG AACAGGCCCC TGACTGGAGG GACGTCCGGT CGTACAGCGA GATCCTGGTA
CCGGTGGCTT ATACCTTTCC GCTGCTGGGC GGGATCACCC CCTTTCTCTT CATCCTCTTC
GTGGCCTGGC TTTATCAGAG CCCGTCGGAT CTAATGCAGC AGGTGCAACT CATTGCCGTG
GGGATTCCCA CCTTCTTCGG TTCATCCAAA CTCTCGGTGG TATCGCTTCT GAATCTGATG
CACCTCCCTG CAGACGCGTA CAACCTGTAT ATCAGCATGG GGATCTTGCG TCAGTGCTTT
GTGGCTGCCC TCTCCTGTAT GTCGATCTTC TCGTTCTCCA CCATCAGCAT CGCCCTCATC
ACGAACCGGG GCCGGATGCG GTGGCGAAGG ATGATCCCAT CAGTCGTGCT CATTCTCTTG
CTGACCTTTA TCATGATTGG AGGTCTGAAG ATGGGTTTCG CTTTGTTGCT GGCCAACACC
TATCATGGGA ACGATCAGAT CTCTCAGATG GATCTTCCTC TCGATTTGAA TGGGGCGAGG
GTGGATGTGG GTATAAATAC TACAGTCTAT TCGCGTGTTG AGGATGTTCC GCCCCTCGGT
CCCTATGACT TGGGTGGAGG AGGGGAGGAT GTCAAACAGA TCCGGGAGCG GGGTGTGCTT
CGGGTGGGGT ATAACAGCAA TAATATCCCC TTTGTCTTCT TCAACGGAAA GGGTGATCTG
GTGGGATATG ATGTACAGAT GGCCTATGAT CTGGCCCGGT TCGTCAATGT CACCAGGGTC
GAGTTCGTCC CTATCACTGG GGCGACCCTC GCTGATTCCC TCAACAGCGG CTACTGCGAC
ATCGTCATGT CCTCGGTTGC AGTCACACCG GAGAGGCTTG ATGAGATGAA GTTCACCGAC
TCGTACGTCA CTGTTCACAT GTCGTTCGTG GTGCCTGACG AACAAAAGGC GGAGTTTTCG
AAGTTGGAGA ACGTGAAGAA GATGAAGGGT CTCCGGGTCG CGGTCTTCAA CAACACGGCG
CTGGTGAAGG TGGCTGCACA GATGCTTCCT GGAGCGACGA TCGTTCCAAT CGACTCAGAG
GAGGAGTTCT TCGTGGAGAA GAAGGCGGAT GCCCTCATCA CCACGGCTGA GGAGGGGTAT
ACGATGACCA TGCAGTACCC GTTCTACGAC GTGGCCATCA TCGAGCCTAA CGACTCGTAC
CAGATGATGT ATGGGTATGC TGTGGCCCAG AATAGTAGTG ATACCTATCT GATGTCGCTC
AATTACTGGC TCAAGATGGA GAAGGACTAC GGGAACCTGA ACGAAAAGTA CAATTACTGG
ATCCTGGGGA AGGATGCCGG ATTGACCGAG CCACGCTGGT CTGTGGTGCG GAACGTGCTG
CACTGGGAGA CCTGA
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| Protein sequence | MRLRSLNLTI WILLGFILGA LAGLFFGDLC SVLKPFSDAF IKIWQITILP SVVLSLIVGI
GSLKRDSARA IAVKAGLVLL LFWAIGVGIF FSFQWAFPPR EAASFFSAQD LTETVGFNII
DQFIPSNPFQ SLSEGIIPAT VLFCLFLGFA LMMDDGSGPI LSSLRILLGA LTRMTSILSR
TFPIGVFVIT ASTAGTMTFE GFLDLQVYLV SLAAATVLLG LVVLPLLITC FTTFRYRDIL
AASSRAVVLA FSTGSEFITL PLIIEGVRKL FEGPSGIPVS SGAGGNADRP DDLPQEDWTG
EMQEQAPDWR DVRSYSEILV PVAYTFPLLG GITPFLFILF VAWLYQSPSD LMQQVQLIAV
GIPTFFGSSK LSVVSLLNLM HLPADAYNLY ISMGILRQCF VAALSCMSIF SFSTISIALI
TNRGRMRWRR MIPSVVLILL LTFIMIGGLK MGFALLLANT YHGNDQISQM DLPLDLNGAR
VDVGINTTVY SRVEDVPPLG PYDLGGGGED VKQIRERGVL RVGYNSNNIP FVFFNGKGDL
VGYDVQMAYD LARFVNVTRV EFVPITGATL ADSLNSGYCD IVMSSVAVTP ERLDEMKFTD
SYVTVHMSFV VPDEQKAEFS KLENVKKMKG LRVAVFNNTA LVKVAAQMLP GATIVPIDSE
EEFFVEKKAD ALITTAEEGY TMTMQYPFYD VAIIEPNDSY QMMYGYAVAQ NSSDTYLMSL
NYWLKMEKDY GNLNEKYNYW ILGKDAGLTE PRWSVVRNVL HWET
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