| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2107 |
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| Symbol | |
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| ID | 7271585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2235694 |
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| End bp | 2237556 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643570719 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002467128 |
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| Protein GI | 219852696 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAAT CGGTAACAGG TACGGCAGGG GTAGGGGATG AACAGGAACT GCGGCGGAGG
CGGTTGTTGC TCGATGCGGC CCCTGCCGGG ATTCTCCTCT TCGAGAACGG GCACTGCGTC
GACCTGAACG CCGGGGCTTT AACCCTGCTT GGATATTCAT CCGGAAGTGA ACTCAGAGGA
TCTCCCCTTA TCATGCTCTC TGCAGAGCGG CAGGCTGATG GGGTCCGGGC AGAGGAACGG
CTCGCCGCGT ATGTGGCTGC TGCAGCAAAG GGAACCCCTC AGACCTTTGA GTGGTTGCTC
CGCCGGCAGG ACCGCAGCAT CGTCGATGCC GAGGTGACCC TCACGCAGGT CATGGATGCA
GGAACCCCCC TGTTGCATGT CTATCTTCAT GACATCACGA CACGCAGACG GCTTGTTGAC
GAGGCGATGG TGGCTCGAAA GCGTGCTGAT GCCATGATCC AGGAGAATCC ATTTCCAATC
ATCGTCTGGG ATGCAGAGAT GCAGGTTCGC CAGGTGAATA GAGCGTTTCT TGCCCTGTCC
GGGTATGACG CCATGGCAGC GATGCGGATG AAGGCCCAGG ACCTGAAGAT CCTGTCCAGT
TCAGGTGAGG GACTCCGGAC CCTGGTGCGG GAGAAGAAGA ACACCCGTGG CGATCTCATT
ATCGAGTACC CAAACGGCAT CTTCACCCTT GAAGCCTACA ACACCCCGCT CTTTGACCTG
GATGGAACGG TAACCGACAT CTTCAGTGTC TACAACGATG TCACCAGGAA GCGTTCTGAT
GATGAACTCC TCAAGGCTAG TGCAGGCGAA CTGGCGGCTG GGCTGGCTGG GCTTGCAGCA
GGGGATCTGA CCTGTGAGGT GATAGTCAGG GCTGGCGATC CGCTGGGCCA GGTCAAACAG
GATCTGAACG CAGCGGTCGC AGCGATCAAG GGGATGGTCG CAGCAGTCAC CCAGGCTATG
GATGAGCTGG CGGCCTCAGC GGAGGAGGCG AATGCTGGGG CTGAACAGGT GGCAGGCGGT
TCCCAGCAGG TGGCCCTCTC TGTCTCTCAC GTCAGCGAGA ATACTGAGCG GGTCAGTTCC
AGCATGATCG TGGTCCTCAA GGGGATGGAG GATATGTCCG CGGCTGTTGA GGAGGCTACC
TCCAGCATCG AGTCGGTCTC GATCCTTGCC AAGGAGACCA ACACCCTCTC CAAGGAGGGG
GCACGCCTTG CATCGAGTGC GGAAGAGAGT ATGGGTGGGA TCAAGACCTC ATCAGACGAG
TCTATTCACC TGGTTTCCCG GATTGACGGA CAGATGAATG AGATTGGAAA GATCGTCGGA
CTGATCCGGG ATCTCGCCAC CCAGACCAAC CTGCTTGCAT TGAACGCGGC GATCGAAGCG
GCCCGGGCAG GGGAAGCCGG TCGCGGCTTT GCCGTGGTTG CTGCCGAGGT GAAGTCGCTT
GCCCTTGAGT CCAAGCACTC AGCAGAGAGT ATCGAAGAGA TGATCGACGG GCTTCGAAAA
CTGTCCAGTC AGGCGACGGT CGCAATGGGC GAGGCCGGAA AGACCGTCGC AGACGGGACG
AAGGTGATCG GAGAGACCCT CGTCTCCTTC AATCGGATTG TGCAGGCTAT CGAGAAGATC
GCAGCGAATA CCGAGGAGGT GGCGGGGGCT TCAGAAGAGC AGGCAGCCAC GGTCGAGGAG
ATCACGATGC AGGTGCAGGA GATGGTGAAT ATGGTGAAGA GCACCGAACA GGAGGCCGCC
GACGCCGCCT CGGCGACTGA ACAGTCGACC GCTGCGATCG ATGAGATCAG CCGGATGATC
GAGAACGTCT CCAGAGTTGC GATGGAATCC ACGGCAGCCA ATAAGAAGTT TCGGATCGTC
TGA
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| Protein sequence | MRESVTGTAG VGDEQELRRR RLLLDAAPAG ILLFENGHCV DLNAGALTLL GYSSGSELRG
SPLIMLSAER QADGVRAEER LAAYVAAAAK GTPQTFEWLL RRQDRSIVDA EVTLTQVMDA
GTPLLHVYLH DITTRRRLVD EAMVARKRAD AMIQENPFPI IVWDAEMQVR QVNRAFLALS
GYDAMAAMRM KAQDLKILSS SGEGLRTLVR EKKNTRGDLI IEYPNGIFTL EAYNTPLFDL
DGTVTDIFSV YNDVTRKRSD DELLKASAGE LAAGLAGLAA GDLTCEVIVR AGDPLGQVKQ
DLNAAVAAIK GMVAAVTQAM DELAASAEEA NAGAEQVAGG SQQVALSVSH VSENTERVSS
SMIVVLKGME DMSAAVEEAT SSIESVSILA KETNTLSKEG ARLASSAEES MGGIKTSSDE
SIHLVSRIDG QMNEIGKIVG LIRDLATQTN LLALNAAIEA ARAGEAGRGF AVVAAEVKSL
ALESKHSAES IEEMIDGLRK LSSQATVAMG EAGKTVADGT KVIGETLVSF NRIVQAIEKI
AANTEEVAGA SEEQAATVEE ITMQVQEMVN MVKSTEQEAA DAASATEQST AAIDEISRMI
ENVSRVAMES TAANKKFRIV
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