| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2104 |
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| Symbol | |
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| ID | 7271582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2231109 |
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| End bp | 2234303 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570716 |
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| Product | MCM family protein |
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| Protein accession | YP_002467125 |
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| Protein GI | 219852693 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family |
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| TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.285341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGAC CCGAGGATGA GTTCGCAGAG ATCAGCGACC GGGTCGCCGA ATGGTCACGA
TTCTTAAAGA CCCGGTACAA GAAGGAACTG ACAGAACTCC TTCGTGAGTA CCCGCACAAA
CGATCCCTGG TGATCGACTA TCACCAGGTC GAGTCCTTTG GAAAGCCGGG TCTCCGGATG
GCCGATGAGA TCCTTGAGAA CCCCGGCAAG GTGATCGAGG ACCTCCGGGA CGCCATCAAG
ACCCAGCACG TGGTCAAGAC CAGGAAGAAC GAGCAGATCC CCAGGGAGAT CAACCTCCGG
TTCATCAATC TGCCGCAAAA GATCTGCGCC CGGGACATTC GGTCCGAACA GATCAACAAG
ATGCTCAGTG TCGAGGGGAT CCTCAGAAAG ACCACCGAGG TGCGTCCCCG GATCGTGGAG
GCGATCTTCC GCTGCCCTGC CGGCCATATG ACCAGACGGA TGCAGGAGTA CGGGCGGTTC
ATCGAGCCTG AGCAGTGCGG GACCGAGGGG TGCACCTTCC GGAAGCTGCA GCTGATGGCC
AAACGCTCCC GGTTCATCGA TGCCCAGAAG GTCAGGATCC AGGAGTCCCC GGAAGGGCTC
CGCGGGGGGC AGCAGCCCCA GACTCTCGAC GTCGACGTCA CCGACGACAT CACCGGGACC
GTCGCCCCCG GCGACCGGGT GGTGATCAAT GGGATCCTTC GCTCCCAGCA GCGGGTCACC
TACGGGACGA AGAGCACCAC CTTCGATATC TATCTGGAGT GCAACTCGAT CGAGGTGGCC
GAGAAGGAGT TCGAGGAGGT GAACATCACC GAGAAGGACG AGGAGGAGAT CATCCGCCTC
TCCACAGACC CGACCATCTA TCGGAAGATC GTCCACTCGA TCGCCCCGAC GATCTATGGG
AATGAGGATG TGAAGGAGGC GATCGCACTG CAGCTCTTCG GCGGGATCAC CAAGGAGATG
CCCGATGGGA GCCGGCTGCG TGGAGATATC CATGTGCTCC TGATCGGAGA TCCAGGTATA
GCAAAGAGTC AGATCCTCCG GTATGTCGTG AACCTCTCAC CGCGAGGGAT CTACACCAGC
GGTCAGTCCT CGACCTCTGC CGGGCTGACG GCCACCGCCG TCAAGGACGA GTTTGGTGAC
GGCAGGTGGA CCCTCGAGGC CGGTGCGCTG GTCCTCGCCG ACATGGGGAT CGCCGCCGTC
GATGAGATGG ACAAGATGCA GAAGGAGGAC CGGTCGGCCC TGCACGAGGC GATGGAGCAG
CAGTGTTATG ATGACCAAAC GGAGATCCTC ACGGAAAAGG GTTGGAAATT TTTCAAAGAT
CTGGGGAAGA ATGAACGGGT AGCATCATTA ACCCAGGATG GATTCCTCAC GTACGAAATC
CCTTCCCAGC ATGTCATATC AGATTACGAC GGGCAGATGT ATTATATCAA GTCCAGGCAG
GTGAACCTCG CGGTAACCCC GAATCATAAC ATGTATGTGA ACCTGAATAA ACGGGCAAAC
GATTGGGAAG GATTCAAACT TATCCGGATG GACGAACTGC CGATTAATAA GCGGATGCGG
TTTAAAAAGA ACGCAAAATG GCAGGGGGAT ACCGTAGCAA CCCATACAGT TCCCGGGATA
ATCAAATTCG GCAATCAGAA CTGTAAGGGA TATGAGACCG AACCGATCAT CGTAAAAATG
GATGACTGGC TGGAGTTTCT GGGATATTTC TTATCAGAAG GAAGCGTCCA GAAACACTGG
GAAACGGGGG TACCGTACCG GGTTAACATA TCCCAGAAGA TCCCAGAATC CACGGAGATC
ATAAGAATAT GTCTCGAAAA ACTGCCGTTT AACTATTCTT ATGATGGGGC AAATTTCTCA
ATTAACTCCA AACAGTTAGC CGGGCACCTT GTAGAATTTG GGAAATGCCA CGAAAAATAC
GTACCGGCGT ATGCAAAACA GGTACCCCCC GAACAGATCC AGATACTCCT GAATGCGTTA
GTATTGGGGG ATGGCTGGAC GAGAAAAACA ACCAGACAGA CGGTATACAT CACCTCTTCA
AAAAGACTGG CAGATGATGT AACAGAGTTA CTTCTAAAAA TTGGCTGGTC TGGGAATATC
TATTGTCAGC ATCATGCCGG GGATACGATA AAGGATCCAC GAGGTATAGA GACGAGATAC
ACCCATGGGA TCTGGGAAGT GTCTTTTATC CGTGACGGAG TGAATGAGCC AAATATCAAT
ACCAATGGGG AAAAACACAT CCAGATCAAG CCATATTCAG GAAAAATCTA CTGCGTGGAA
GTTCCCGAGC ATCTGCTGTA TGTAAGAAGA GACGGGATTC CAGTTTGGTG CGGAAACACC
ATCAGTGTGG CCAAAGCCGG GATCACCGCG ACCTTAAAGA CCCGGTGTGC CCTGCTCGGA
GCGGCCAACC CCAAGCTCGG CCGGTTCGAT GAGTATGCCG ATATCGGAGA GCAGATCAAC
ATGCCCCCTT CGCTCCTCTC CCGGTTCGAC CTGATCTTCA TCCTGACCGA CAAGCCGGAT
CACAAACGGG ACGAGGCGAT CGCCGACTTC ATCATCAGGT CACACGGGGT GGGCGAACTG
ATCGCCCAGC ACAGCCGGGA TCCAATCGAG GGCGTGACCG ACGAGTACAT CACCCAGCAA
CTCGCCCCGG TCACCCCGGA CATCGACGCC GGCATGCTGC GGAAGTACAT CGCCTATGCA
AAGCGGACCT GTTTCCCGAT CCTCAGCACT GAAGCGAAGG AGACCCTGAT CGCCTACTAC
ATGAAACTCC GTGACCTGGC CGACTCCAAC AAGCCGGTCC CGGTGACGGC ACGGCAGCTC
GAGGCACTGG TCAGGCTGGC CGAGGCCAGC GCACGGGTCA GGCTGAGCAA GTCTATCGAG
AACTCAGATG CCGAACGGGT CGTGAAGATC GTCGACACCT GTCTGCGGCA GGTGGCCTAC
GATGCCAAGA CCGGCACCTT CGATATCGAC AAGGTCGCGA CCGGGATCTC CAAGGGGAAG
CGGGACATGA TCCGGATGAT CAAGGATGTG ATCCGGGAGA ACGGCGATGT CAGTGGTAGA
GCCCAGATCC AGCAGGTGAT CGACCTCGTC GCCCAGCAGG GGTTCGGCAA GGACGAAGTG
AAGAAACAGA TCGATGCCTT CCTCCGGAGT GGCGAAGCGA TGGAGCCCAA GAACGGGGTC
ATCAAACTGA TCTGA
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| Protein sequence | MSGPEDEFAE ISDRVAEWSR FLKTRYKKEL TELLREYPHK RSLVIDYHQV ESFGKPGLRM
ADEILENPGK VIEDLRDAIK TQHVVKTRKN EQIPREINLR FINLPQKICA RDIRSEQINK
MLSVEGILRK TTEVRPRIVE AIFRCPAGHM TRRMQEYGRF IEPEQCGTEG CTFRKLQLMA
KRSRFIDAQK VRIQESPEGL RGGQQPQTLD VDVTDDITGT VAPGDRVVIN GILRSQQRVT
YGTKSTTFDI YLECNSIEVA EKEFEEVNIT EKDEEEIIRL STDPTIYRKI VHSIAPTIYG
NEDVKEAIAL QLFGGITKEM PDGSRLRGDI HVLLIGDPGI AKSQILRYVV NLSPRGIYTS
GQSSTSAGLT ATAVKDEFGD GRWTLEAGAL VLADMGIAAV DEMDKMQKED RSALHEAMEQ
QCYDDQTEIL TEKGWKFFKD LGKNERVASL TQDGFLTYEI PSQHVISDYD GQMYYIKSRQ
VNLAVTPNHN MYVNLNKRAN DWEGFKLIRM DELPINKRMR FKKNAKWQGD TVATHTVPGI
IKFGNQNCKG YETEPIIVKM DDWLEFLGYF LSEGSVQKHW ETGVPYRVNI SQKIPESTEI
IRICLEKLPF NYSYDGANFS INSKQLAGHL VEFGKCHEKY VPAYAKQVPP EQIQILLNAL
VLGDGWTRKT TRQTVYITSS KRLADDVTEL LLKIGWSGNI YCQHHAGDTI KDPRGIETRY
THGIWEVSFI RDGVNEPNIN TNGEKHIQIK PYSGKIYCVE VPEHLLYVRR DGIPVWCGNT
ISVAKAGITA TLKTRCALLG AANPKLGRFD EYADIGEQIN MPPSLLSRFD LIFILTDKPD
HKRDEAIADF IIRSHGVGEL IAQHSRDPIE GVTDEYITQQ LAPVTPDIDA GMLRKYIAYA
KRTCFPILST EAKETLIAYY MKLRDLADSN KPVPVTARQL EALVRLAEAS ARVRLSKSIE
NSDAERVVKI VDTCLRQVAY DAKTGTFDID KVATGISKGK RDMIRMIKDV IRENGDVSGR
AQIQQVIDLV AQQGFGKDEV KKQIDAFLRS GEAMEPKNGV IKLI
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