| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2101 |
|---|
| Symbol | |
|---|
| ID | 7271579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2228441 |
|---|
| End bp | 2229211 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643570713 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_002467122 |
|---|
| Protein GI | 219852690 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1407] Predicted ICC-like phosphoesterases |
|---|
| TIGRFAM ID | [TIGR00024] putative phosphoesterase, SbcD/Mre11-related |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTCT CATTCATCGA GAGCGGGCCG GCACTGCTCG TAAAGGGTAA TGAGGAAACC
CTGGTGATCG CCGATCTCCA CTTCGGGATC GAATCGAATC TGGCCCGCCA TGGATATCAT
CTTCAGAGCA GGTCAAAGGA GCGTGCCGAG CGGGTGCTCG CGCTGGTTCG AGACCTGAAA
CCCGACCGGC TGCTGCTGCT CGGGGACGTG AAGCAGTCGA TTCCGCTGAC GACCCGGCAG
GAGTACCGGG AACTCCCGGC AGTTCTGGCT GCGTTTCGTG ATGCTGCATT CCTGCAGGTT
ATCCCCGGCA ACCACGATGC CGGGCTTGAA CGCTTCCTCG AAGAAGGGGA ACTGCTCCCT
GCCACCGGGG CGGTGATCGA CGGGGTCGGC TACCTGCACG GGCACACGAT CCCTGACCCG
GCGCTCGCCG GCCACCTGAT CATCATCGGT CATCACCACC CGGTCGTCTC CCTGATCGAC
GAGGTCGGGT GCGCGGCGAG GATGCCGGCC TATCTGCGGG CCCCGCTCGA TGAGCGTGCC
CTGTGGGGTG CTGGAAGGTC CGATGAACCC GGCAGTACCG GCCTGAATCA GACCCGGGCG
CTGCTGATGC CAGCCTTCAA TGAACTCTCC GGCTTCGACA TCACGAAGAT CGTCGGTGAC
CCGTCCAGCC CGGTCTCGCG GGCGATCATC AGGGACGAGG CAGAGGTCTT TCTCGCAGAC
GGGACCTTCA TCGGCCCGTA CTGCTCGCTG GAGGAAGATG CCCGCCACTG A
|
|---|
| Protein sequence | MHLSFIESGP ALLVKGNEET LVIADLHFGI ESNLARHGYH LQSRSKERAE RVLALVRDLK
PDRLLLLGDV KQSIPLTTRQ EYRELPAVLA AFRDAAFLQV IPGNHDAGLE RFLEEGELLP
ATGAVIDGVG YLHGHTIPDP ALAGHLIIIG HHHPVVSLID EVGCAARMPA YLRAPLDERA
LWGAGRSDEP GSTGLNQTRA LLMPAFNELS GFDITKIVGD PSSPVSRAII RDEAEVFLAD
GTFIGPYCSL EEDARH
|
|---|
| |