Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2100 |
Symbol | |
ID | 7271578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2225761 |
End bp | 2228454 |
Gene Length | 2694 bp |
Protein Length | 897 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643570712 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002467121 |
Protein GI | 219852689 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCA CTGATCTGCT TCATCCCCGG GTTCGCGCCT GCCTGTCAAA GCGGGGTTTC GAGGACCTCT CCCCTGCCCA GGAGCAGTCG ATCCCGCTGC TCGTCAAAGG GAAGCACCTG CTGGTGATCG CTCCGACCGG CACCGGCAAG ACCGAGAGTG CGATGCTCCC GGTCTTCGGC GGGATGCTCT CGGGGGAGGG TGGAGGGTTT CAGGCCCTGT ACATCACCCC GCTCCGTGCC CTGAACCGGG ACATTCTCGG GCGGATGGAG TGGTGGTGCC GCGAGCTCGG GCTGACGGTT GGAGTTCGGC ATGGGGACAC GTCGACATCC GAACGGAGAA AACAGTCCCT CTCCCCGCCG GATCTGCTGA TCACCACCCC GGAGACCCTG CAGGCGCTCT TCATGGGCAG CCAGCTCCGC AAGCACCTCG CGAAGGTTCG GTACGTGATC GTCGACGAGA TCCATGAACT GGCCGGCTCT AAGCGGGGAG CTCAACTTTC TGTGGCGCTG GAGCGGCTGG CGGTCTATGC CGGGAACTTT CAACGGATCG GTCTCTCGGC CACGGTCGGT AATCCAGAGG AGATCGCTGC GTTCCTCTCC GGGGCGGGTC GTTCGGCTGC GATCGTCCAG GTGCCGATCT CCAAGTACCT CGACCTCACC GTGGTCTATG CAGGGGAGAA ACTGTCAAGG CAGGCGCGAT GTGTGGAACA GGCGCTTGCG ACACCCGGTT CGCATCTCGT CTTCACCAAC ACCCGGGTGA CCGCCGAAGC GCTCGGTCAC CTCCTCTATG ACCGGGGGGA TCTCGAGGTC CATCATGGTT CGCTCTCAAA GGAGGTCCGG ATCGCCGCCG AGGAACGGTT CCGGAATGGT GAGATCACCA CCCTGATCTG CACCTCATCG ATGGAGCTCG GGATCGATAT CGGGTATGTC GAGCAGGTGG TACAGTTCAG TTCCCCGCGG GAGGTCTCGC GGCTGATCCA GCGGGTCGGC CGGGCCGGAC ACCGGATGGA CCGGGTCTCG CACGGGACGG TCCTCGCCAC CGGGTTCGAC GACCTGCTCG AGTCGCTGGT GATCGCCCGA CGGGCCAAGG CGAACGAGGT TGAGAAGGTC AGGATTCCCC GAGGTGCAGG TGACGTCCTG GCCAATCAGG TCGCCGCGAT TGCGGTCGAA TACGGTGAGA TCTCCCGGAC GGCGATCCGG GCGATCCTCG AACGAACCGC CCCATTCGCC GGCACCGGCC CTCTGCTCGA TCAGGTCTGC GAACAGATGG CCCTCCACCG GCTGATCAGG CTCGAAGGGG ATCTGGTGAT CACCACCGGC CGGGCCCGAC GCTACCTGAC CGCGAACCTC TCGATGATCC CGGACGAGCG GAAGGTGCCG GTCTTCGACA TGGTCTCGCG GAGGACGGTC GGGACGCTCG ACGAGTCGTT CGTGGTCGGC TGGGTCACCA CGGGGGCGGT CTTCATCACC AAGGGACAGC TCTGGCGGGT GCTCGACATC GAGGATGGCC GGTTGATCGT CGAGCCGGCG ACCAAGGCCA AGGGAGAGCT CCCCTCCTGG GAGGGGGAGC AGATCCCGGT CCCGTTCGAG GTGGCTCAGG AGGTCGGGCA CCTCCGGGGG TCCCGGCAGG TGGAGTCCTA CACCGACAGC CGGCGGTCCA TCGCCTATGT CGATACGTTC CTCTCGGAGA TGGATAAGAA CCGCTCGGTC GTTCCGACCG ACCGTCTGAT CACTCTCGAG AACACCGACG AGGGGGTGAT CTGCAACATC TGTGCCGGCC ACAGGGCCAA CGAGGTGATC GGCCGGGTCC TCTCCCTCCT CCTCTCTGCC CGATACGGAA CCTCGGTCGG GATCGAGATC GACGCTTACC GGGTGCTCCT CCGCCTTCCG GGATCGGTTC GGGCCGCTGA GGTGAAGGAG ACGCTCTTCT CCCTGGAACC GTCCTATATC CAGGGGATCC TTGAGATAGG ACTGAAACGA ACGGCGCTGT ACAAATGGAA ACTGGTGCAG GTGGCCAAGA AGTTCGGTGC GATCGACGCC GATGCCGACT TCGAGCGGAT CAGTATCCAC CGCCTCTCCG AACTCTTCGA TAAGACCGTG ATCCAGCAGG AGGCGTACCG TGAACTCTTC TCGGCCTACA TGGACGTCGA GGGGGCGTCC CGGGTGATTG GGGATCTGAA GGCCGGCTCG ATCGAGGTCA CGATCGGCAG GGTCAGCATC CTCGGAGCGG CAGGCCTCTT CTCATCCCGT GACCTGATCA CCCCTGCTTC AGTGGACCCG GCGGTACTCG GCACGATCAG ACGGCGGATC GAGGAGCAGG ATGTGATCCT CTGCTGCATG CACTGTAGAA TGTGGAAGAG CAGGACGAAG GTCAGCCGGG TTCCCGACCA GCCGGTCTGC CCGAATTGCG GGGCAAAGTT GATCGCTGCG TTGAAACCGT GGGACGAGCC GCTCTATGCG ATAGCGAACA AGAAGAATAA GAACGCAGAG GAGCGGGCAG TCGAGGTGAA ATTGATCAGG ACGGCAAACA TCGTCCTCTC AAGCGGGAAA AAAGCGGTCA TCGCCCTCTC CGGGAGGGGG GTCGGGCCGG AACATGCGTC CCGGATCCTC GCAACCCTGA CCGAGGGCGA TCCGTTCTAT CGTGAAATTT TAAAGGCAGA GCGTCACTAT GTGCAGACTC ACCAGTTCTG GTGA
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Protein sequence | MPATDLLHPR VRACLSKRGF EDLSPAQEQS IPLLVKGKHL LVIAPTGTGK TESAMLPVFG GMLSGEGGGF QALYITPLRA LNRDILGRME WWCRELGLTV GVRHGDTSTS ERRKQSLSPP DLLITTPETL QALFMGSQLR KHLAKVRYVI VDEIHELAGS KRGAQLSVAL ERLAVYAGNF QRIGLSATVG NPEEIAAFLS GAGRSAAIVQ VPISKYLDLT VVYAGEKLSR QARCVEQALA TPGSHLVFTN TRVTAEALGH LLYDRGDLEV HHGSLSKEVR IAAEERFRNG EITTLICTSS MELGIDIGYV EQVVQFSSPR EVSRLIQRVG RAGHRMDRVS HGTVLATGFD DLLESLVIAR RAKANEVEKV RIPRGAGDVL ANQVAAIAVE YGEISRTAIR AILERTAPFA GTGPLLDQVC EQMALHRLIR LEGDLVITTG RARRYLTANL SMIPDERKVP VFDMVSRRTV GTLDESFVVG WVTTGAVFIT KGQLWRVLDI EDGRLIVEPA TKAKGELPSW EGEQIPVPFE VAQEVGHLRG SRQVESYTDS RRSIAYVDTF LSEMDKNRSV VPTDRLITLE NTDEGVICNI CAGHRANEVI GRVLSLLLSA RYGTSVGIEI DAYRVLLRLP GSVRAAEVKE TLFSLEPSYI QGILEIGLKR TALYKWKLVQ VAKKFGAIDA DADFERISIH RLSELFDKTV IQQEAYRELF SAYMDVEGAS RVIGDLKAGS IEVTIGRVSI LGAAGLFSSR DLITPASVDP AVLGTIRRRI EEQDVILCCM HCRMWKSRTK VSRVPDQPVC PNCGAKLIAA LKPWDEPLYA IANKKNKNAE ERAVEVKLIR TANIVLSSGK KAVIALSGRG VGPEHASRIL ATLTEGDPFY REILKAERHY VQTHQFW
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