Gene Mpal_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2100 
Symbol 
ID7271578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2225761 
End bp2228454 
Gene Length2694 bp 
Protein Length897 aa 
Translation table11 
GC content63% 
IMG OID643570712 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_002467121 
Protein GI219852689 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA CTGATCTGCT TCATCCCCGG GTTCGCGCCT GCCTGTCAAA GCGGGGTTTC 
GAGGACCTCT CCCCTGCCCA GGAGCAGTCG ATCCCGCTGC TCGTCAAAGG GAAGCACCTG
CTGGTGATCG CTCCGACCGG CACCGGCAAG ACCGAGAGTG CGATGCTCCC GGTCTTCGGC
GGGATGCTCT CGGGGGAGGG TGGAGGGTTT CAGGCCCTGT ACATCACCCC GCTCCGTGCC
CTGAACCGGG ACATTCTCGG GCGGATGGAG TGGTGGTGCC GCGAGCTCGG GCTGACGGTT
GGAGTTCGGC ATGGGGACAC GTCGACATCC GAACGGAGAA AACAGTCCCT CTCCCCGCCG
GATCTGCTGA TCACCACCCC GGAGACCCTG CAGGCGCTCT TCATGGGCAG CCAGCTCCGC
AAGCACCTCG CGAAGGTTCG GTACGTGATC GTCGACGAGA TCCATGAACT GGCCGGCTCT
AAGCGGGGAG CTCAACTTTC TGTGGCGCTG GAGCGGCTGG CGGTCTATGC CGGGAACTTT
CAACGGATCG GTCTCTCGGC CACGGTCGGT AATCCAGAGG AGATCGCTGC GTTCCTCTCC
GGGGCGGGTC GTTCGGCTGC GATCGTCCAG GTGCCGATCT CCAAGTACCT CGACCTCACC
GTGGTCTATG CAGGGGAGAA ACTGTCAAGG CAGGCGCGAT GTGTGGAACA GGCGCTTGCG
ACACCCGGTT CGCATCTCGT CTTCACCAAC ACCCGGGTGA CCGCCGAAGC GCTCGGTCAC
CTCCTCTATG ACCGGGGGGA TCTCGAGGTC CATCATGGTT CGCTCTCAAA GGAGGTCCGG
ATCGCCGCCG AGGAACGGTT CCGGAATGGT GAGATCACCA CCCTGATCTG CACCTCATCG
ATGGAGCTCG GGATCGATAT CGGGTATGTC GAGCAGGTGG TACAGTTCAG TTCCCCGCGG
GAGGTCTCGC GGCTGATCCA GCGGGTCGGC CGGGCCGGAC ACCGGATGGA CCGGGTCTCG
CACGGGACGG TCCTCGCCAC CGGGTTCGAC GACCTGCTCG AGTCGCTGGT GATCGCCCGA
CGGGCCAAGG CGAACGAGGT TGAGAAGGTC AGGATTCCCC GAGGTGCAGG TGACGTCCTG
GCCAATCAGG TCGCCGCGAT TGCGGTCGAA TACGGTGAGA TCTCCCGGAC GGCGATCCGG
GCGATCCTCG AACGAACCGC CCCATTCGCC GGCACCGGCC CTCTGCTCGA TCAGGTCTGC
GAACAGATGG CCCTCCACCG GCTGATCAGG CTCGAAGGGG ATCTGGTGAT CACCACCGGC
CGGGCCCGAC GCTACCTGAC CGCGAACCTC TCGATGATCC CGGACGAGCG GAAGGTGCCG
GTCTTCGACA TGGTCTCGCG GAGGACGGTC GGGACGCTCG ACGAGTCGTT CGTGGTCGGC
TGGGTCACCA CGGGGGCGGT CTTCATCACC AAGGGACAGC TCTGGCGGGT GCTCGACATC
GAGGATGGCC GGTTGATCGT CGAGCCGGCG ACCAAGGCCA AGGGAGAGCT CCCCTCCTGG
GAGGGGGAGC AGATCCCGGT CCCGTTCGAG GTGGCTCAGG AGGTCGGGCA CCTCCGGGGG
TCCCGGCAGG TGGAGTCCTA CACCGACAGC CGGCGGTCCA TCGCCTATGT CGATACGTTC
CTCTCGGAGA TGGATAAGAA CCGCTCGGTC GTTCCGACCG ACCGTCTGAT CACTCTCGAG
AACACCGACG AGGGGGTGAT CTGCAACATC TGTGCCGGCC ACAGGGCCAA CGAGGTGATC
GGCCGGGTCC TCTCCCTCCT CCTCTCTGCC CGATACGGAA CCTCGGTCGG GATCGAGATC
GACGCTTACC GGGTGCTCCT CCGCCTTCCG GGATCGGTTC GGGCCGCTGA GGTGAAGGAG
ACGCTCTTCT CCCTGGAACC GTCCTATATC CAGGGGATCC TTGAGATAGG ACTGAAACGA
ACGGCGCTGT ACAAATGGAA ACTGGTGCAG GTGGCCAAGA AGTTCGGTGC GATCGACGCC
GATGCCGACT TCGAGCGGAT CAGTATCCAC CGCCTCTCCG AACTCTTCGA TAAGACCGTG
ATCCAGCAGG AGGCGTACCG TGAACTCTTC TCGGCCTACA TGGACGTCGA GGGGGCGTCC
CGGGTGATTG GGGATCTGAA GGCCGGCTCG ATCGAGGTCA CGATCGGCAG GGTCAGCATC
CTCGGAGCGG CAGGCCTCTT CTCATCCCGT GACCTGATCA CCCCTGCTTC AGTGGACCCG
GCGGTACTCG GCACGATCAG ACGGCGGATC GAGGAGCAGG ATGTGATCCT CTGCTGCATG
CACTGTAGAA TGTGGAAGAG CAGGACGAAG GTCAGCCGGG TTCCCGACCA GCCGGTCTGC
CCGAATTGCG GGGCAAAGTT GATCGCTGCG TTGAAACCGT GGGACGAGCC GCTCTATGCG
ATAGCGAACA AGAAGAATAA GAACGCAGAG GAGCGGGCAG TCGAGGTGAA ATTGATCAGG
ACGGCAAACA TCGTCCTCTC AAGCGGGAAA AAAGCGGTCA TCGCCCTCTC CGGGAGGGGG
GTCGGGCCGG AACATGCGTC CCGGATCCTC GCAACCCTGA CCGAGGGCGA TCCGTTCTAT
CGTGAAATTT TAAAGGCAGA GCGTCACTAT GTGCAGACTC ACCAGTTCTG GTGA
 
Protein sequence
MPATDLLHPR VRACLSKRGF EDLSPAQEQS IPLLVKGKHL LVIAPTGTGK TESAMLPVFG 
GMLSGEGGGF QALYITPLRA LNRDILGRME WWCRELGLTV GVRHGDTSTS ERRKQSLSPP
DLLITTPETL QALFMGSQLR KHLAKVRYVI VDEIHELAGS KRGAQLSVAL ERLAVYAGNF
QRIGLSATVG NPEEIAAFLS GAGRSAAIVQ VPISKYLDLT VVYAGEKLSR QARCVEQALA
TPGSHLVFTN TRVTAEALGH LLYDRGDLEV HHGSLSKEVR IAAEERFRNG EITTLICTSS
MELGIDIGYV EQVVQFSSPR EVSRLIQRVG RAGHRMDRVS HGTVLATGFD DLLESLVIAR
RAKANEVEKV RIPRGAGDVL ANQVAAIAVE YGEISRTAIR AILERTAPFA GTGPLLDQVC
EQMALHRLIR LEGDLVITTG RARRYLTANL SMIPDERKVP VFDMVSRRTV GTLDESFVVG
WVTTGAVFIT KGQLWRVLDI EDGRLIVEPA TKAKGELPSW EGEQIPVPFE VAQEVGHLRG
SRQVESYTDS RRSIAYVDTF LSEMDKNRSV VPTDRLITLE NTDEGVICNI CAGHRANEVI
GRVLSLLLSA RYGTSVGIEI DAYRVLLRLP GSVRAAEVKE TLFSLEPSYI QGILEIGLKR
TALYKWKLVQ VAKKFGAIDA DADFERISIH RLSELFDKTV IQQEAYRELF SAYMDVEGAS
RVIGDLKAGS IEVTIGRVSI LGAAGLFSSR DLITPASVDP AVLGTIRRRI EEQDVILCCM
HCRMWKSRTK VSRVPDQPVC PNCGAKLIAA LKPWDEPLYA IANKKNKNAE ERAVEVKLIR
TANIVLSSGK KAVIALSGRG VGPEHASRIL ATLTEGDPFY REILKAERHY VQTHQFW