Gene Mpal_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2078 
Symbol 
ID7271555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2204757 
End bp2205446 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content62% 
IMG OID643570689 
Productprotein of unknown function DUF124 
Protein accessionYP_002467099 
Protein GI219852667 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTACA CGATAACAGG CGACAACCTG CAGATGGTCA CCCTCTCCCT TGTAGAGGGT 
GAAGAGATCG CCGCCGAAGC CGGGGCGATG GTCAATATGA GCGGCAATAT GAAGATGACC
AGTGCGGTGA CCGGCGGGCT CTTCAAGGGG CTGAAACGGA TGGTAACCGG CGAGAGTTTC
TTCCTCTCCC ACTTCACCCC ATCCGGGGGC GGAGGACAGG TGGCCTTCGC CGGGAACGTG
CCCGGCAAGA TCGTTCCGGT CTCCTTCAAC GGGAACGAAT TCATCGCCCA GCGGGACGCC
TACCTCTGCG CAGAGATGGG GGTCGACCTG GACATCGCCT TCACCAAACG GATCCGGGCC
GGCATCTTCG GCGGCGAAGG GTTCGTGATG CAGAAACTGA GCGGTCACGG AACGGCCTTC
CTCCACTGCT GCGGGGATGT CGTTGAGATG ACCCTCGCCC CGGACCAGGT GATGAAGGTC
CAGACCGGGC TGGTCGTCGG GTTCGATTCG ACGGTCAGGT ACGACATCGC CCGTGCCGGC
GGGGTCACCA CCATCCTCTT CGGCGGGGAA GGGCTCTTTC TGACGACACT GCAGGGGCCC
GGAAAGGTGG TGCTCCAGTC GATGGACGTG GCAAAACTGG CACAGGCGCT CACACCGTTC
CTGCCTCATC CCGAATCCGG GTCACAATGA
 
Protein sequence
MQYTITGDNL QMVTLSLVEG EEIAAEAGAM VNMSGNMKMT SAVTGGLFKG LKRMVTGESF 
FLSHFTPSGG GGQVAFAGNV PGKIVPVSFN GNEFIAQRDA YLCAEMGVDL DIAFTKRIRA
GIFGGEGFVM QKLSGHGTAF LHCCGDVVEM TLAPDQVMKV QTGLVVGFDS TVRYDIARAG
GVTTILFGGE GLFLTTLQGP GKVVLQSMDV AKLAQALTPF LPHPESGSQ