| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2070 |
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| Symbol | |
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| ID | 7271547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2192413 |
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| End bp | 2194821 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643570682 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002467092 |
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| Protein GI | 219852660 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.002169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC AACTTCAAAG ACTGATCAGG CCGCTGATCG TGCTGATCCT CGTCTCCAGT
CTTTTGCTTA TCCCGCCGGT GACGGCAATG CACACAGAGA CGCTAACAGG TACCGTAGTT
GATTCCTACA CCCATCAACC AATAAACCAT GTAGAGATCA CTACCTCACA AGTGCCCGGT
CCTCATTTTT ATACTGATTC TAATGGGGTT TTCTCAATCG AAGTGGATAA TTCCCAGAGC
GGGATTTCTT ATACCCTGGG CCTCACGCCT CCTGAGGCTG CTGATTACCA GTACCGTGAT
AGGGAGATCA CCTATTCATT TAGTGCTGCA GAAATTTCAG CCAGATCAAA GGATCTTGGG
CAGATCGAAC TCACCCGAAA GGTTTCAGGG TACGTCACTG ATTCTGTTAC GGGGCAGCCA
TTATCGGGTG TGCATGTCTC TCTGGGTCCC TCGTCGGGTA CCTCGGATGG TAATGGATAT
TATTATATTC GGTTGCAAGA TGCAGGCCTT AATCAAAATG GCCTCTCCTT CAGGGGTGTA
TATTACTTGA TTGCGACCAA GGATGGATAT CTGTCTTCCT CCATTCCGTT TGGTATCTAT
GATGGGGATG GAACTCATCT CTATAACATC CAGCTCACCC GGGCCTTCAC GGCGAACTTC
TACGCCTTTG GCCACGTCGG CCAGGCTCCG TACTCAGTCC GGTTCATGGA TCAGTCCGTT
GGCTCGCCGA CCGCCTGGAA GTGGGATTTC GGGGATAACA CGACCTCGAC CGAGCAGAAC
CCGACGCATG TCTACAACCG GACCGGCGCC TATAACGTTG CCCTGACCGC CTCGAACGAC
CAGGCGAGCG ACACCTGCAC CCAGTACCGA TGTGTCATCG TGAACGACGT GCCTGTGGCG
AACTTCACGA CCAATGCGAC CTCCGGCCAG ACGCCGTTCT CGGTGCAGTT CACCGACCAG
TCCACCAGCG GTGCGGACGG GTACCAGTGG CAGTTCGGCG ATGGTGCGAC CTCGACCGAA
CAGAACCCGG TCCACACCTA TACGACCTCC GGGTCATACA CGGTGATGCT GACGGTCTCC
GAGCCCAACT ATGGGAGTGT CTTCGTCCAG AAGCCGGGGT ACATCACGGT CGGCGACCCC
TCGACGATCG GGTTCTCGGC GAACGTGACG ACCGGTCTCT CACCGCTTCC GGTGCAGTTC
AACGAGTCGG TGAACGGATC TGTCCAGTAC TCGTTCTGGC ATTTCGGTGA CGGTTCGACC
TCGATGGATT CCAACCCGGT CCACGTCTAT GATACGCCCG GCCAGTACAC GGTCTCGCTG
ATGACCGTCG GCTCCAATGG AACTGAGACA AAGACGATTG AGGACTTCAT CAACGTCACC
GCCCCAGTAA CCCCGACAGT AACTCCAACA TCGACGGTAA CACCGACACC GACCGGAGCC
CTGCCGGTGG CGAACTTCAC GGTCATGGCC GGTGCCCCCG GCTCGCTGGC GATCCAGGTG
ACCGACACCT CGACGAACGC AACCTCGGTC CGCTACGATC TCGGTGACGG TACGACTACC
GCCTATCGGA ACTTCCAGTT CACCTACTGG CAGGCCGGGA CGTACACGAT CGAACAGACC
GCGACCAATG CTGCGGGATC ATCGATGAAG ACGGTCGAGG TTATCGTGCC AGCGACCACC
CCAACGCCGA CGATCACGTT CCCGCCTATC GGCGGGGATC AGGGATGGTA TACCGTCCAC
TGTAATGTTG ACGGGGCGAC GGTCATCTTC GATCAGACCA CAATGGGTAC AATCGCACAG
GGGATCCTGA AGATACCTGT CTATGTTACT GGATCACCCT ATGGAACCTA CACAGTCCAG
AAAGACGGAT ACTCCACTGT CTCAGGGGTC ATCACAGAAC ATCCCGGCAA GGACCAGAAC
GTGGATATAA CCGTGCACCT GACCCCGACC TCCACCCCGT ACAACGGTCC GCACACGATC
CCCGGAACGC TGCAGGCCGA GGATTATAAC CTCGGCGGTG AGGGTGTCGC CTATCACGAC
ACCACTGCCG GCAATGAGGG TGGTGCGTAC CGGCATGACG ACGTGGATAT CGAGCAGCTC
GACACTGACG GCTCGCCGAA CGTCGGCTGG ATCCGTGCCG GCGAGTGGCT CGCGTACACG
GTGAATGTCA CCACCGCCGG CACTTACAAC GCCGGATTCC GGGTTGCGTC TTCTCACAGT
GGTTCAACCG TCCAGGTCTA CGTTGACGAC GGTACGACCC CGGTCGCGAC GGTGAGCGTC
CCGAACACTG GCGACTGGCC GGCCTTCCAG ACCGTCTCGA TGCCGGTGAC CCTGCCGGCC
GGTCAGCACC GACTCATGTT GAAGTTCCCG ACCGACTACG TCAACATCAA CTGGATCAGT
TTCACCTGA
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| Protein sequence | MTTQLQRLIR PLIVLILVSS LLLIPPVTAM HTETLTGTVV DSYTHQPINH VEITTSQVPG
PHFYTDSNGV FSIEVDNSQS GISYTLGLTP PEAADYQYRD REITYSFSAA EISARSKDLG
QIELTRKVSG YVTDSVTGQP LSGVHVSLGP SSGTSDGNGY YYIRLQDAGL NQNGLSFRGV
YYLIATKDGY LSSSIPFGIY DGDGTHLYNI QLTRAFTANF YAFGHVGQAP YSVRFMDQSV
GSPTAWKWDF GDNTTSTEQN PTHVYNRTGA YNVALTASND QASDTCTQYR CVIVNDVPVA
NFTTNATSGQ TPFSVQFTDQ STSGADGYQW QFGDGATSTE QNPVHTYTTS GSYTVMLTVS
EPNYGSVFVQ KPGYITVGDP STIGFSANVT TGLSPLPVQF NESVNGSVQY SFWHFGDGST
SMDSNPVHVY DTPGQYTVSL MTVGSNGTET KTIEDFINVT APVTPTVTPT STVTPTPTGA
LPVANFTVMA GAPGSLAIQV TDTSTNATSV RYDLGDGTTT AYRNFQFTYW QAGTYTIEQT
ATNAAGSSMK TVEVIVPATT PTPTITFPPI GGDQGWYTVH CNVDGATVIF DQTTMGTIAQ
GILKIPVYVT GSPYGTYTVQ KDGYSTVSGV ITEHPGKDQN VDITVHLTPT STPYNGPHTI
PGTLQAEDYN LGGEGVAYHD TTAGNEGGAY RHDDVDIEQL DTDGSPNVGW IRAGEWLAYT
VNVTTAGTYN AGFRVASSHS GSTVQVYVDD GTTPVATVSV PNTGDWPAFQ TVSMPVTLPA
GQHRLMLKFP TDYVNINWIS FT
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