| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2067 |
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| Symbol | |
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| ID | 7271307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2185520 |
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| End bp | 2187979 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570679 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002467089 |
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| Protein GI | 219852657 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.517806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATG CAATGCAAAT CGATGCGTTT ATTGGTTCTT CCCCCAATTT CCAATATACC
AATACAACAT CCGATCTGGT TTTAATGATT GTTACAACGG AAAAAATGAG ATGGGTGCTG
CTGATGAGCG CGCTGGTCGC GGTCTGCTGC ACCCCGGTAT ATGCATCGTC ACTGTTTACC
GGTGCCCCTT CCCCAACCAG TAGCGTACCC AACACGGTGA GTGAGTTCTC AGTATCCTAC
TCTGCCGATC AGTATCAGCG GAATCTCACC ATCCCCCGAT CCGATTCATT TTTTGACATT
GCTGGGATGG CTGTGGACGC TCCCAACCGG ACGCTCTTCG TCACGACAGG TCGATATATT
CATCAAGGAT ATCCTGAATC TTATAATCTT ACAGTCATCG ATACTACGAC GATGCAGCAG
GTGACGACGG TCCCCATGCT GGATGTAATG ACGGGAGTCA GTGGCAGTGC GTTCGACTCG
GGGCATAACC GTCTGTATGT CTATTCGTCT GATTTAGGGA GTTTGTTTCG GTATGTGTGG
GATTCCACTA CTCAGACACT GACCCTCGAC GGGGACCCGA TCGGCCTATC GGATGGTTGT
AGTGCATTTG CTGTAGATCC GGTCGAAGAT GTGCTCTATG TGGTAACATA TTCAGGTACT
ATACAGAGAT ACAGCACCGT ATCCGGGAGT CGCCTGGAAG ATCTCACCCT CCCGGAACCC
ATGGAGGTCA ATTTCCTTAC AGTCGATGAA GTGAACCACT GTCTCTATAT GTGGGCTATG
GCTTCTGATT CCACTATTCA CCTTGTCTGT CTGAACCCCA CCAGCAACCT TCTCACCCAG
GGAGACACGA TTACCGGTGC TGAAGTAACA GCACAGGTTG TGGATCCCGC ATCTCATTAC
CTCTATGTTG GGACGACCCG TAAAGTCTCA GATGGCGATG ACCCTCTGAT GATTCCCGAG
ATCAGAGTGT ATGACAGTTC CCTGAGACTG AAGAACACGA TCCCCGCCGG CCCCTCGGAT
CTCATAGCAA CCAAGTCCGA CCACCTGCTG GAACCAGTTT ATCTGGCCAT CATCTCTGAT
GGAATCGTTC CCCCGACCCC GACCCCTACG CCGACATCAG CCATCACGGC CGGCTTCTAC
GCCTTCGGCC ACGTCGGCCA GGCTCCGTAC CCGGTTCGGT TCCTTGACCA GTCGACTGGC
TCGCCGACCG CCTGGAAGTG GGATTTCGGG GATAACACGA CGTCGACCGA GCAGAGCCCG
ACGCATATCT ACAATCAGAC CGGCGCCTTC AACGTTGCCC TGACCGCCTC GAACGACCAG
GCGAGCGACA CCTGCACCCA GTACCGGTGC GTCATCGTCA ACACCGTGCC GGCCGCGAAC
TTCACGGCCA ACGCGACCGC CGGCCGGACA CCATTCACCG TTCAGTTCAC CGACCAGTCG
ACTGGGGCGA CCGGGTATCA GTGGCAGTTC GGTGATGGCA CGACGTCGAC CGAGCAGAAC
CCGGTCCACA CCTATACGAC CCCCGGGTCG TACTCGGTGA TGTTGACAGT CTCCGAGCCC
AACTACGGGA GTGTCTACAC GCAGAAGCCC GGGTACATCA CGGTCACCGA CCCGCCGACG
GTCGGGTTCT CGGCGAACGT GACGGCTGGT CTTGCCCCGC TCGCCGTCCA GTTCAACGAG
TCGACGAACG GTTCGGTCCA GTATTATTAC TGGCAGTTCG GCGACGGGGG AACTTCGTTC
GACCAGAACC CTGTTCATAT CTATACCAAC GCCGGCAGTT ACACCGTCTC CCTCTACGCG
ATCGGTTCGA ACGGAACAGA GGCGAAGACG GTCGATCAGT ACATCACCGT CACCTCGCCG
GTGACGCCGA CCCCCACCAC GCCGGCACCG GTGAACACCA CGACGGTACC GACGACGCTG
GTTCCGACCG CAACCGTCAC CCTGGTGCCA ACGAACACCA CCGTGGTTCC TACAGTCACG
ACAGTCGCTC CGACTGTCAC CGGTTCGGCC TATAACGGCC CGCACACGAT CCCCGGAACG
CTGCAGGCCG AGGACTACGA CCTCGGCGGT GAGGGCGTCG CCTATCACGA CACCACTCTA
GGTAATGAGG GCGGCGTCTA CCGGCATGAC GACGTCGATA TCGAGCAGCT CGACACCGAC
GGGTCGCCGA ACGTCGGCTG GATCCGTGCC GGTGAATGGC TTGCGTACAC GGTGAACGTC
AGCACGGCCG GCACCTATAA TGCTGGGTTC CGTGTTGCGT CCTCCCACTC CGGTTCATCG
ATCCAGGTCT ATGTCGACAA TGGTACGACG CCCGTCGCGA CGGTGAGCGT CCCGAACACC
GGCGACTGGC CCGTCTTCCG GACCGTCTCG GTGCCGGTGA CCCTGCCGGC CGGGCAGCAC
CGGCTGAGAC TTTCGTTCCC GACCGACTAT GTCAACATCA ACTGGATCAG TTTCACCTGA
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| Protein sequence | MQYAMQIDAF IGSSPNFQYT NTTSDLVLMI VTTEKMRWVL LMSALVAVCC TPVYASSLFT
GAPSPTSSVP NTVSEFSVSY SADQYQRNLT IPRSDSFFDI AGMAVDAPNR TLFVTTGRYI
HQGYPESYNL TVIDTTTMQQ VTTVPMLDVM TGVSGSAFDS GHNRLYVYSS DLGSLFRYVW
DSTTQTLTLD GDPIGLSDGC SAFAVDPVED VLYVVTYSGT IQRYSTVSGS RLEDLTLPEP
MEVNFLTVDE VNHCLYMWAM ASDSTIHLVC LNPTSNLLTQ GDTITGAEVT AQVVDPASHY
LYVGTTRKVS DGDDPLMIPE IRVYDSSLRL KNTIPAGPSD LIATKSDHLL EPVYLAIISD
GIVPPTPTPT PTSAITAGFY AFGHVGQAPY PVRFLDQSTG SPTAWKWDFG DNTTSTEQSP
THIYNQTGAF NVALTASNDQ ASDTCTQYRC VIVNTVPAAN FTANATAGRT PFTVQFTDQS
TGATGYQWQF GDGTTSTEQN PVHTYTTPGS YSVMLTVSEP NYGSVYTQKP GYITVTDPPT
VGFSANVTAG LAPLAVQFNE STNGSVQYYY WQFGDGGTSF DQNPVHIYTN AGSYTVSLYA
IGSNGTEAKT VDQYITVTSP VTPTPTTPAP VNTTTVPTTL VPTATVTLVP TNTTVVPTVT
TVAPTVTGSA YNGPHTIPGT LQAEDYDLGG EGVAYHDTTL GNEGGVYRHD DVDIEQLDTD
GSPNVGWIRA GEWLAYTVNV STAGTYNAGF RVASSHSGSS IQVYVDNGTT PVATVSVPNT
GDWPVFRTVS VPVTLPAGQH RLRLSFPTDY VNINWISFT
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