| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2061 |
|---|
| Symbol | |
|---|
| ID | 7272042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2176414 |
|---|
| End bp | 2177100 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643570673 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002467083 |
|---|
| Protein GI | 219852651 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1891] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.44131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC TGGTCAGCCC TAGCAGTCCT GAGGAGGCTC AGCGTTCGCT CGCTGCTGAT
ATCATTGACG TGAAGAAGCC CTCAGAGGGA TCTCTGGGTG CAAACTTCCC CTGGGTGATC
AGGGCGATCA AGGCGATGAC CGAGAAACCG GTCAGCGCTG CAATCGGCGA CTTTGACAAC
AAGCCGGGCG GTGCTGCTCT TGCCGCGTAC GGGGCGGCCT GTGCCGGTGC CGATTACATC
AAGGTCGGGC TGATGCTCAA CGACCCTGCG GCCGCGGCCG AGGTGATCGA GGGTGTCGTC
CGGGCGGTCA AGGATGATTT CCCTGAGAAG TACGTGGTGA TCGCGGCGTA TTCTGATTAT
GAACGGCTCG GAACGATCTC TCCGTTCGAT ATGACCCCGC TGGCAGCAGC GGCGGGCGCG
GACTTTGCGA TGATCGATAC CGGCAGGAAG GACCGGCGGT CCACCTTTGA GTTCATGGAC
ACAGAGGCGC TGACCCGGTT CACCGCGATG AACCGGGACG CCGGCCTCGG GACGGCCCTG
GCCGGCTCGC TGGTCTTCGA GGATCTCCCG GTCCTGAAAA GGATCGATCC GGAGATCATC
GGTGTCCGCG GTATGGTCTG CGGCGGCGAT CGAAACGCGA CCATCCGCGA GGATCTGGTC
GCCAGGGCGA TTGCGGAGGT GCGGTGA
|
|---|
| Protein sequence | MKLLVSPSSP EEAQRSLAAD IIDVKKPSEG SLGANFPWVI RAIKAMTEKP VSAAIGDFDN
KPGGAALAAY GAACAGADYI KVGLMLNDPA AAAEVIEGVV RAVKDDFPEK YVVIAAYSDY
ERLGTISPFD MTPLAAAAGA DFAMIDTGRK DRRSTFEFMD TEALTRFTAM NRDAGLGTAL
AGSLVFEDLP VLKRIDPEII GVRGMVCGGD RNATIREDLV ARAIAEVR
|
|---|
| |