Gene Mpal_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2050 
Symbol 
ID7272031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2167382 
End bp2167825 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID643570662 
Producthypothetical protein 
Protein accessionYP_002467072 
Protein GI219852640 
COG category[S] Function unknown 
COG ID[COG1673] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.610136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.977803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCT GGCTCTGCAT GGCCGATCGC ACGAACGCCG CTATCGTAAA AGAGCGCCTC 
GTCTGGGGTG TGCCGGCTCG GTACCGGAAT ACAATCGGCA GGGTACATCC CGGCGACACG
CTCCTGATCT ATGCCCGGCA GGAGCACGCC GCCGGCGAGA CCCTCCCCTC CATCGTCATG
GCCGCCTATG ATGTCGTCTC CCCGGTCTTC GAGGACACAG AGCCCATCTT CACGGCGCCG
GCCTTTCTCC CTGGCGAGGT CTTCCCAATG CGAGTGAAGG TAAAACCCCT GCCGGATATC
AGCGAGCCGG TCCCGTTCAA ACCACTCGTG CCGGCCCTCT CATTCATCAA GAACAAGGTC
ATGTGGTCGG GATCCATCCG AGCCATGCGG ACGATCCCGG AAGAGGATTA TCAGCGGATC
GTCGCCGGGG GCAAAGGAAA CTGA
 
Protein sequence
MTRWLCMADR TNAAIVKERL VWGVPARYRN TIGRVHPGDT LLIYARQEHA AGETLPSIVM 
AAYDVVSPVF EDTEPIFTAP AFLPGEVFPM RVKVKPLPDI SEPVPFKPLV PALSFIKNKV
MWSGSIRAMR TIPEEDYQRI VAGGKGN