| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2009 |
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| Symbol | |
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| ID | 7271990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2133727 |
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| End bp | 2134248 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643570623 |
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| Product | Transcription factor TFIIE, alpha subunit |
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| Protein accession | YP_002467033 |
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| Protein GI | 219852601 |
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| COG category | [K] Transcription |
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| COG ID | [COG1675] Transcription initiation factor IIE, alpha subunit |
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| TIGRFAM ID | [TIGR00373] conserved hypothetical protein TIGR00373 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.735877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.179064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGCCA CCGCTGAATT GCTGAACGAT CCTGCGATCA GGTCATATCT GCTCCGCCTG
ATCAAAGACG AGGGGATTGC GCTCATTGAG AGATTTCCCG ACGAAGGTGA GCACAGCGAC
GAGGAACTCG CCGAGGTCAC CCATATCAAC CTGAATACGG TCAGGCATAC CCTCTATACC
CTCTATGAGA AGCGGCTCGC CGAGTACCGA CGGATCAAGA ACAATGAGAC CGGCTGGCTG
ACCTACCTCT GGCAGCTCCG CCTCGATATG ATCTATACCT CGATATCCGA GGATATGGAG
TTGATCCAGG AGAAACTCCG TAAAAAAGAG CGTTATGAAG AGGAGAACGA TTTCTTCCGG
TGCAACGATT GCGGCCTTTT GCTGACCTTC AACCTTGCGA TGGACCATGA CTTCACCTGC
TCAGAGTGCG GGGGGACAAT GGGCCACTTT GACAACGAGG TCCTGCTCGC AGCGTTGAAG
CGGCGCAGAG TTGCGATTGG AGAGTCCCTT GGGCATGAGT GA
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| Protein sequence | MVATAELLND PAIRSYLLRL IKDEGIALIE RFPDEGEHSD EELAEVTHIN LNTVRHTLYT
LYEKRLAEYR RIKNNETGWL TYLWQLRLDM IYTSISEDME LIQEKLRKKE RYEEENDFFR
CNDCGLLLTF NLAMDHDFTC SECGGTMGHF DNEVLLAALK RRRVAIGESL GHE
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