Gene Mpal_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2008 
Symbol 
ID7271989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2133240 
End bp2133734 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content61% 
IMG OID643570622 
Productmetal dependent phosphohydrolase 
Protein accessionYP_002467032 
Protein GI219852600 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR00295] conserved hypothetical protein TIGR00295 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.180889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA AGAACGAACG ATATATCGAA CTCCTCCGGG CGGCTGGATG CAGCCGCTCG 
GTGATCCGGC ACTGCTCGGT CGTCGCAGCC ACTGCAGCTG CCCTTTCAGC AGAGTCCCCT
TTTTTTGATC ACGATCTGGT GGAAGCCGGG GCGTTCCTTC ATGACATCGG TCGTTCGGTC
ACCCACAGCA TTGGGCATGC ACAGGCCGGC GCAGACCTCT GCCGGTCCCT CGGGCTCGGT
GAGGACCTCG CGCGGATTGT CGAATGTCAT ACCGGTGCAG GTCTGACGGC GGACGAGTGC
ATCCAGCTCG GGCTCCTCCC GATCGACTGT ATGCCCTCGA CCCCCGAGGG CGCGCTGGTG
GCCTGTGCTG ACAACCTGGT CAGGGGTGAA CAGGTGATCA CCATCGAAGA GCGGTTAGAT
ATGGCGTACG CGCTGAGTCG GAAGGTTCGG ATGCGGATGT ACCGGCAGCA CCAGTACCTG
CAGATGCTCA TATGA
 
Protein sequence
MSEKNERYIE LLRAAGCSRS VIRHCSVVAA TAAALSAESP FFDHDLVEAG AFLHDIGRSV 
THSIGHAQAG ADLCRSLGLG EDLARIVECH TGAGLTADEC IQLGLLPIDC MPSTPEGALV
ACADNLVRGE QVITIEERLD MAYALSRKVR MRMYRQHQYL QMLI