| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1998 |
|---|
| Symbol | |
|---|
| ID | 7270804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2124771 |
|---|
| End bp | 2125910 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643570613 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_002467024 |
|---|
| Protein GI | 219852592 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.312706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT TGCGTGTTGC CAGTGATCTC TACCCTACCA CGGTGGGTGG GTACGGGATC
CATGTGCACG AGATGTCAAA GATGCAGGCA ACACTCGGCC ATGATGTAAC GGTCGTCACC
TCCAATCCCA ATGGCCTACC GGAGGAGGAG TACGTCGATG GGTATCGGGT GCTCAGGTTC
AACCATGCGA TCAAGATGGT TGGGAACACG ATCAGCCCGA CGATGATGTT TCGGCTCCTC
GAGATGAGGA ACGACTATGA TATCATCCAC GCCCATTCGC ACCTCTTCTT TCCGACCAAC
GTCTGTGCCC TGGTGAAACG GTACGGTTCC TCGCCGCTGG TGATCACCAA TCATGGGATC
ATGTCGGCCA GTGCTCCGCA GTGGTTGAAC ATCTCGTACA TGTCGACGAT CGGGAAGTGG
ACGCTGAACT CTGCCGACCG TGTTATCTGT TACACTGACA TCGAGCGGAG ACGGTTGATC
GAGGAGTTTG GAATCAATAA GCCAGAAGTG GTCGTGATCC CGAACGGGGT GAACACCGAG
GTCTTTCACC CGGACGATAG CAAGGTGGAC GAGCGCTACT TCACGCTGCT CTGGGTGGGC
AGGATCGTCA AGGGCAAGGG GGTTGAGTTT CTGATCCACG CCGCACACCG GGTGCTTGAG
AAGATTCCGA ATCTGCGGAT CCTGGTGATC GGGGAGGGAC CTGAACGGGA TGAGATCTGG
AAACTGGTCA ATGAGTATCA TATGACCAAT ATCGTGACGA TCCTGCCGTT CATGAGTTAC
GATGCCATCC CTCTGCTGTA CCAGCGCTCT GACGTGCTGG TGCTGCCGAG TCTGCAGGAG
GGGGTACCCC GGACGATGCT GGAAGCGATG GCATCCGGAA AGCCGGTGAT TATTTCAGAG
TTCGATCATC TGAAGGATCT CGCCGAGGGG GCTGCGCTGA TGTTTCCCAA AGGAGACGTG
GCGGCCCTTG CAGAAAAGAT CCTGCTGCTC GAACAGGACC GTGAGCGTGT TCATCGGATG
GGCGTCTGTG GAAGAGAGCG GATATTGGCG CAGAACTCGT GGAAGAACAC GGTTCTTCGG
ACGATCACCC TGTACCAGGA ACTGCTCTCT CAAGATCAGT CGCCGGTGAA GCGTCACTGA
|
|---|
| Protein sequence | MKILRVASDL YPTTVGGYGI HVHEMSKMQA TLGHDVTVVT SNPNGLPEEE YVDGYRVLRF
NHAIKMVGNT ISPTMMFRLL EMRNDYDIIH AHSHLFFPTN VCALVKRYGS SPLVITNHGI
MSASAPQWLN ISYMSTIGKW TLNSADRVIC YTDIERRRLI EEFGINKPEV VVIPNGVNTE
VFHPDDSKVD ERYFTLLWVG RIVKGKGVEF LIHAAHRVLE KIPNLRILVI GEGPERDEIW
KLVNEYHMTN IVTILPFMSY DAIPLLYQRS DVLVLPSLQE GVPRTMLEAM ASGKPVIISE
FDHLKDLAEG AALMFPKGDV AALAEKILLL EQDRERVHRM GVCGRERILA QNSWKNTVLR
TITLYQELLS QDQSPVKRH
|
|---|
| |