| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1991 |
|---|
| Symbol | |
|---|
| ID | 7270797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2116038 |
|---|
| End bp | 2117501 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643570606 |
|---|
| Product | cobyric acid synthase |
|---|
| Protein accession | YP_002467017 |
|---|
| Protein GI | 219852585 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.213046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGA TGATCCTCGG TACCTCATCA CATGTCGGCA AGAGTGTGAC GGTGGCTGCG
ATCTGCCGGA TCATGATCAG ACAGGGGATC AGTGTCGCCC CGTTCAAATC CCAGAATATG
AGTTTGAATT CATATGTGAC CAGGGACGGA GCAGAGATCG GGATAGCCCA GGCGATGCAG
GCCTTCGCCG CCAGGGTGCT TCCCTCGGCA CTGATGAACC CGGTGCTCCT CAAACCCAAA
GGGGACAGCA CCTCGCAGGT GGTGCTGCTC GGCCACCCGT ACAAGGACGT TCAGATAAGA
GACTATTACC AGGAGACCGA TCACCTCCTT GAGATCGCCG TCGACGCCTA CCACCAACTG
GTCGAGGAGT ATGGAGCAGT GATCGTCGAA GGGGCCGGCG GTGCTGCAGA GGTGAACCTC
TACGACCGGG ACATCGCCAA CATCAGGCTG GCTGAACATC TCCGGCTCCC CATCGTCCTC
GTGGCGGACA TCGAACGAGG CGGCGTCTTT GCCCAGGTCT ACGGCACGAT CGCCCTGCTG
CCCGAGCAGA TTCGTCCCCT GGTGAAGGGG ATCATCATCA ACAAGTTTCG GGGAGACCCG
ACCCTCTTCG AGAGCGGGGT GAAGACCCTC GAGGATCTGA CCGGCGTGCC AGTGCTCGGG
GTCATCCCCT ACACCCGGCT CGATCTACCG AGCGAGGACT CCCTCTCCCT GCAGGACAAG
GAACGGCAGA CCGGCCTGGT TCGGATCGCC GTGATCCGAC TTCCGCAGAT CGCAAACTTC
ACCGACTTTG AACTGCTCGA ACGGCATGCG GCCGTCGACT ATCTGCTGCC CGGAGAATCG
CTGGACGGAT ACGACTGCAT CATCATCCCC GGAACCAAGA ACACGGTGAA CGATCTGCTG
GCACTCCAGG CGAGCGGTAC GGCAGCGGCC ATCAGAGATG CCCGCGGACA GGGAGTGCCG
GTGATCGGGA TCTGCGGTGG ATACCAGATG CTGGGAAAGA CTGTGATCGA CGATGGGTCT
GAAGCCCGCA AGGGAACCTA TGAAGGGCTT GGACTGCTCG ATCTGGTCAC CACCTTCGAA
GGATATGATA AGACGACCGT CCAGGTGCAG AGGACCGCAG CCCCGGTGCC GCCGATCCTG
GATGCGATGG GGACGGTGTC CGGCTATGAG ATCCACATGG GCACGACCGT ACTGAAGAGC
GGAAGAACGG CCTTCGCCGG GGAGGGGGCG GTGTCGGACG ATGGTCTGGT CTTCGGCACC
TACCTCCACG GCCTCTTTAT GGTCCCGGCA GCGGCAGAGG CGCTCCTCTC CTACCTGTAC
TCCCAAAGAG GGCTCACCTT CACAGGGATT GAAGAGCAGA ACGAGGACCC GTACGACCTG
CTCGCAGACC ACTTCGAGGC ACACCTGCAG ATGGAGAGAC TGCTCACCCT CTGCAGCGAT
CACACCCCGG AGACCCCGGT GTAG
|
|---|
| Protein sequence | MSLMILGTSS HVGKSVTVAA ICRIMIRQGI SVAPFKSQNM SLNSYVTRDG AEIGIAQAMQ
AFAARVLPSA LMNPVLLKPK GDSTSQVVLL GHPYKDVQIR DYYQETDHLL EIAVDAYHQL
VEEYGAVIVE GAGGAAEVNL YDRDIANIRL AEHLRLPIVL VADIERGGVF AQVYGTIALL
PEQIRPLVKG IIINKFRGDP TLFESGVKTL EDLTGVPVLG VIPYTRLDLP SEDSLSLQDK
ERQTGLVRIA VIRLPQIANF TDFELLERHA AVDYLLPGES LDGYDCIIIP GTKNTVNDLL
ALQASGTAAA IRDARGQGVP VIGICGGYQM LGKTVIDDGS EARKGTYEGL GLLDLVTTFE
GYDKTTVQVQ RTAAPVPPIL DAMGTVSGYE IHMGTTVLKS GRTAFAGEGA VSDDGLVFGT
YLHGLFMVPA AAEALLSYLY SQRGLTFTGI EEQNEDPYDL LADHFEAHLQ MERLLTLCSD
HTPETPV
|
|---|
| |