Gene Mpal_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1982 
Symbol 
ID7270788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2110362 
End bp2110829 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content59% 
IMG OID643570597 
ProductPeptidylprolyl isomerase 
Protein accessionYP_002467008 
Protein GI219852576 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.336344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATG AGACAGGCAA GAAGGCTGTT CTGCATACCT CGATGGGCGA TGTGACCATC 
CAGCTGGATG CGGATATGCC GGTGACCGCA GGAAATTTCG AGTCTCTCGT GCAGAAAGGC
TACTATAACA ACGTGACCTT TCACCGGGTG ATCGACGGGT TCATGATCCA GGGCGGCGAC
CCGAAGGGTG ACGGCACCGG CGGGCCCGGG TATGTGATCC CTGATGAGTT CACGGCCCAC
AATAAGAACG ACCGTGGGAC CATCTCGATG GCCAATGCCG GCCCCAACAC CGGTGGCAGC
CAGTTCTTCA TCAACCTGGT GAACAACAAC TTCCTGGACC AGAAGCACCC GGTCTTTGGA
AAGGTCGTCA GCGGGATGGA GGTCATCGAC GCGATCGCAA AGGTCCGGAC CGACCGGAGC
GACCGCCCGC AGACCCCGGT GACGATCGTC ACGGCAGAGA TCATCTGA
 
Protein sequence
MANETGKKAV LHTSMGDVTI QLDADMPVTA GNFESLVQKG YYNNVTFHRV IDGFMIQGGD 
PKGDGTGGPG YVIPDEFTAH NKNDRGTISM ANAGPNTGGS QFFINLVNNN FLDQKHPVFG
KVVSGMEVID AIAKVRTDRS DRPQTPVTIV TAEII