Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1967 |
Symbol | |
ID | 7270772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2087710 |
End bp | 2088339 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643570581 |
Product | protein of unknown function DUF47 |
Protein accession | YP_002466993 |
Protein GI | 219852561 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0784272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCTCA GACAATGGTT AATTCCGCAG GATAAAGAGT TCTTTGACCT GTTCGAGGAG ATGGTAGGGA CGGTTGTTGA AGCGGCCAAT GCCCTGGTCG AACTGATGAA CGATTATACT GACCTTGGTG CAAAGAGTCA GCATATGAAG GAACTCGAGC ATGAGGGCGA CCGGATCACC CATGCGATCT ATGAGGGGCT GAACCGGACT TTTATCACTC CGCTTGAACC CGAGGAGATC TCCCGCCTGG CGACGGCGAT GGATGATGTC ATCGACTGTA TCGAAGGGAC CGTGCAACAA CTCCACAACT ATGGGATTCC GGCAACTGAC TCTCCGATGC GTCAGTTCTC AAAGTTGATC CAGCTCAGCG CGACCGAGAT GCAGACTGCT GTGAAGGGTA TACGATCGAT GAAGGACGTG CAGTCGATCG AAGCCCGGTG TATCGAATTG AACCGGCTTG AGAACGTCGC CGACGAGGTG CTCGGGCATG CGCTGACCGA ACTCTTCCGG GGTAGCGACC CGCTCACCAT CATTAAATTG AAGGATGTCT ATGAGAATCT CGAACAGGCC ACGGATCGTT GTGAGGATGT GGCCAATGTG CTCTCTGATA TTGTAATCAG GCATTCGTGA
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Protein sequence | MDLRQWLIPQ DKEFFDLFEE MVGTVVEAAN ALVELMNDYT DLGAKSQHMK ELEHEGDRIT HAIYEGLNRT FITPLEPEEI SRLATAMDDV IDCIEGTVQQ LHNYGIPATD SPMRQFSKLI QLSATEMQTA VKGIRSMKDV QSIEARCIEL NRLENVADEV LGHALTELFR GSDPLTIIKL KDVYENLEQA TDRCEDVANV LSDIVIRHS
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