Gene Mpal_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1962 
Symbol 
ID7270766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2083155 
End bp2083622 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID643570575 
Productprotein of unknown function DUF82 
Protein accessionYP_002466988 
Protein GI219852556 
COG category[S] Function unknown 
COG ID[COG1656] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000351454 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00501017 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTCGGCA CGCTGACCCG GTACCTCCGG TGCATGGGCT ATGATACCCT CAGTGCGAAC 
TCGTTCCCTG TCGGGGATCC GAAGGAGGAC ACATTCCTTC TCTCGCTCGC AGGAGAAGAG
GGGCGGGTGC TACTGACCCG CGACCATGAA CTGGCCCGGC GGGGAAAGAA CAGGGCCGTG
CTGATCCGCT CGGACGATGT GCTCGATCAG GTCAGGCAGC TGACCGCACT TGGGCTGGTG
ACCCCGCAGG TCGTTACTTC CCGCTGTCCG CTCTGCAATG GTCTCCTCTC CCCGGCCACC
GTCGAGCAGG TCGCCTCCGC CGCCACGTAT GCCCCCGCCG ACCAGGTGGG GATCCTGTTC
TTCTGGTGTC ACCACTGCGG TCGGCTGTAC TGGCAGGGGT CGCACGGCGA CGACCTGCAG
CAGCGACTCT CCACGATCTG CTCCGTGCGG TTCTGCAATT CTGATTGA
 
Protein sequence
MLGTLTRYLR CMGYDTLSAN SFPVGDPKED TFLLSLAGEE GRVLLTRDHE LARRGKNRAV 
LIRSDDVLDQ VRQLTALGLV TPQVVTSRCP LCNGLLSPAT VEQVASAATY APADQVGILF
FWCHHCGRLY WQGSHGDDLQ QRLSTICSVR FCNSD