| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1961 |
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| Symbol | |
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| ID | 7270765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2080236 |
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| End bp | 2082758 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570574 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002466987 |
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| Protein GI | 219852555 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00050409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0219561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATC TACTCAAAAG AATGACCTGG CCGCTGATTA TGCTGGTCAT CGTCTCATGC
CTGCTGATGA TCGCATCGGC GACGGCGGAT CCCGTGACCC CGTCCATCAT CGACTGCACC
CCAGACCATG CTATGGCCAA CAATACCTGG GTTTCCTTCA CCCTCAACTG CACCGGATTC
TCCGGGACAC CCACGGTCTG GCTTGCGATG GCCGGCCAGA CGAACATCTC CGCCTCCAGT
GAAGAACTGG ATGGAACCAC CATCACCGGA TACTTCGACC TTCTGAATAA AGTCCCAGGC
AGCTGGGAGG TATGGGCTGC GAACGGAACC GATCCCGGGG TCAAATGGAA CGGCACGTTC
ACGATCGATC CGATGCCGAC GGTGAATCTG ACCGGTAAAG TCGTCGATCA CTTCACCGGC
CTTCCCCTGT CGAATGTGGT GATCTATAAT TTTGATTACG GCCCCTCGAC TGTCTCCCAG
GCAGATGGGA GCTTCACCCT CCCTGACGCC TGGGTTATCG AAGGGAAAGC GAATCTGGAC
GTCTGGGCGG CAGGGATCTA TCGGGATAAT TACACCGACG TCTCTGTCAC GGAAGGGGAT
CTGCAGCGCG GGTCGAAGGA TATCGGAACG ATCGAACTCT ACCCCATCTT TGCCGGTTTC
GTAACCGACA AAATTACGGG CAAACCTCTC CCGGATGCGC ACGTCTCCCT CATCATAAGT
TCATCGGAAC CGGTCCTTGC CTCAGGGGTA TCGAACAGTC AGGGATATTA CGTTCTTCAA
ATTACAGATG CGAACTCCGG TTCAGATAAA AAACTGCGTG ACGCCGGTGT CGAATCTCAA
ATTCCCGGTC TGTACCTGAC TGCAGAGAAA GATGGATATG AACCCTACTC TACCGGGTTA
TCTCTGATTA GTTTGGGTGA AGATTACCTC TATAATATCG AGCTCACCCC GATCTTCACT
GCGGACTTCC TGGCCTCCGG CCATGTCGGT CAGGCCCCGT TCTCGGTCCG GTTCCTGGAC
CAGTCGACCG GTTCTCCAAC TATCTGGAGA TGGGACTTCG GGGACGGCAC CACCTCCACC
GAGCAGAACC CGACCCATGT CTACACCAGG ACCGGTGTGT ACACTGTCTT CCTGATCACG
GCAAACGATT GGGCGACCGA CATCTGCACT AAGTCCCGAT GCATCGTTGT GAACACCGTG
CCGGTGGCGA ACTTCACGGC TAATGCGACC TCGGGGTCGA CACCCTTCAC CGTGCAGTTC
ACGGACCTGT CAACCGGTGC GGAGTCCTTC GAGTGGCAGT TTGGTGACGG CACAACGTCG
ACCGAACAGA ACCCGGTCCA CACCTATACA CAGCCGGGCA CCTACACCGT GACTCAGGTC
GTCTCCCGGG GAGAGTATGG CAGTGTCTTC GTGGAGAAGC CAGGATACAT TTCGGTGAGC
AACCCATCAA CGATCGGGTT TTCATCGAAT GTGACCAGGG GACCCTCCCC ACTTGCCGTG
CAGTTCACCG AGTCGACGAA CGGCTCGGCC CGGTACTTCT TCTGGCAGTT CGGCGACCAT
GCAACCTCGA ACGAGCCGAA CCCGGTTCAC ATCTATAGCG AGGCCGGTCA GTACACCGTC
TCCCTCTATG CGGTCGGTTC GAACGGGACG GAGGTGAAGA CGGTAGAAAA TTATATCAAC
GTCACCTCGC CGGTGATTCC TACACCGACC GTCACGACGA CCGTGACACC AACCCCGACT
GAGCGGGACC TGCCAGTGGC GAACTTCACC ATAACCTCAC AGGGAGGCCC GGGTTCGCTC
GCTATTCAGG TGACCAGCAC CGCAGTGAAT GCAACCTCGG TGCAGTTCGA CCTCGGTGAC
GGCACGACCA CCGCGTATCC GAACTTCCAA TACACCTACT GGCAGGCCGG CACCTATACG
ATCAAACAGA CTGCGACCAA TGGGGCAGGA TACTCGACAA AGATCCTCAC TGTAACCGTG
CCGGCGGTCC CGGTCACGAC ACCGACTGTC TCCCCGACTG TGACCGTCTC ACCGACGGTA
ACCGTTACCG GTTCGGCCTA CAACGGCCCG CACACCATTC CGGGCACCCT GCAGGCCGAG
GATTACGACC TCGGCGGGGA GAGTATCGCC TACCATGACA CCACCGCCGG CAACGAGGGT
GGGGTCTACC GGCATGACGA TGTCGACATC GAGGTGCTCG ACACTGACAG AAGTCCGAAC
GTCGGGTGGA TCCGTGCCGG TGAATGGCTC GCGTACACCG TGAACGTAAA TGCTACCGGC
ACCTATGATG CCGGGTTCCG GGTCGCGTCC TCCCACAGCG GCTCAACGGT CCAGGTGTAT
GTCGATGGTG GGAGTACCCC CGTCGCGACG GTAAACGTCC CGAACACCGG CGACTGGCTG
ACCTTCCAGA CCGTCCAGGT GCCGGTGACC CTGCCGGCCG GGCAGCACCG GCTGGTGTTG
AAGTTCCCGA CTGACTTTGC CAACATCAAC TGGATCACCT TCGCCCAGAA TGGCGGGGTA
TAA
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| Protein sequence | MTDLLKRMTW PLIMLVIVSC LLMIASATAD PVTPSIIDCT PDHAMANNTW VSFTLNCTGF
SGTPTVWLAM AGQTNISASS EELDGTTITG YFDLLNKVPG SWEVWAANGT DPGVKWNGTF
TIDPMPTVNL TGKVVDHFTG LPLSNVVIYN FDYGPSTVSQ ADGSFTLPDA WVIEGKANLD
VWAAGIYRDN YTDVSVTEGD LQRGSKDIGT IELYPIFAGF VTDKITGKPL PDAHVSLIIS
SSEPVLASGV SNSQGYYVLQ ITDANSGSDK KLRDAGVESQ IPGLYLTAEK DGYEPYSTGL
SLISLGEDYL YNIELTPIFT ADFLASGHVG QAPFSVRFLD QSTGSPTIWR WDFGDGTTST
EQNPTHVYTR TGVYTVFLIT ANDWATDICT KSRCIVVNTV PVANFTANAT SGSTPFTVQF
TDLSTGAESF EWQFGDGTTS TEQNPVHTYT QPGTYTVTQV VSRGEYGSVF VEKPGYISVS
NPSTIGFSSN VTRGPSPLAV QFTESTNGSA RYFFWQFGDH ATSNEPNPVH IYSEAGQYTV
SLYAVGSNGT EVKTVENYIN VTSPVIPTPT VTTTVTPTPT ERDLPVANFT ITSQGGPGSL
AIQVTSTAVN ATSVQFDLGD GTTTAYPNFQ YTYWQAGTYT IKQTATNGAG YSTKILTVTV
PAVPVTTPTV SPTVTVSPTV TVTGSAYNGP HTIPGTLQAE DYDLGGESIA YHDTTAGNEG
GVYRHDDVDI EVLDTDRSPN VGWIRAGEWL AYTVNVNATG TYDAGFRVAS SHSGSTVQVY
VDGGSTPVAT VNVPNTGDWL TFQTVQVPVT LPAGQHRLVL KFPTDFANIN WITFAQNGGV
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