| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1952 |
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| Symbol | |
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| ID | 7270756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2066522 |
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| End bp | 2067370 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643570566 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
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| Protein accession | YP_002466979 |
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| Protein GI | 219852547 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0727116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCGTA CAAAAGCAGC CTCTCAGGCC CTGTATACCA AGGTCACCGA GGCGACCGTG
AGTGCCTGCC GGAAGGCCGT GATTTACCTG CCGGAGGATG TGAAGCATGT GCTTAAAAAG
GCCCGTAAAA AAAATGAACT CGACCCTGTA GCGCTGGGTG AACTGGAGAA CATCCTTGAT
AACCTCGCCT GTGCGGAGAA GTATCAGGTG CCGCTCTGCC AGGACACCGG GGTGCTGGTG
GTCTATATGA CGATCCCCCC GACCGTCCCG CTGACCGAGG AACTCTATGA TGCCGTTCGG
GCAGGAGTCC GGAGGGCAAC TGCTGAGGTT CCCCTCCGAC CGAATGTGGT CGACCCAATC
ACCCGGGTGA ACTCCGGGGA TAACACTGGT GAGGGGATGC CGGCGATCCA TGTCAGACCA
GGGGCTACCC TCTCGATCAC CGTCCTTCCG AAGGGGGCCG GCGCAGAGAA TACCTCGCAG
ATCGCGATGC TCCTCCCCTC GCAGAAGGAC CGGATCGAGG AGTTCGTCGT GAAGACGGTG
CTGGAGGCCG GGAGCCGCCC CTGCCCGCCG CTGGTGATCG GCATCGGGAT CGGCGGGACC
TTTGATGAGG TTGCCGCCCT CGCGAAGGAG GCGTTGCTGC AGCCGATCGA CCGAATGGAC
CTGTTTGAGC AGGGACTTTG CGATACACTG AACACGCTTG GTATCGGGCC GATGGGGCTC
GGGGGGAAAA CATCCGTCCT TGCTGTAAAA ATGAAGAAGG GTGCCTGCCA CACGGCCTCG
CTGCCGGTGG CGGTGAACGT CCAGTGCTGG GCGAACCGGC GGGCGACCAT CGTGGTGGAG
GTCGACTGA
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| Protein sequence | MQRTKAASQA LYTKVTEATV SACRKAVIYL PEDVKHVLKK ARKKNELDPV ALGELENILD
NLACAEKYQV PLCQDTGVLV VYMTIPPTVP LTEELYDAVR AGVRRATAEV PLRPNVVDPI
TRVNSGDNTG EGMPAIHVRP GATLSITVLP KGAGAENTSQ IAMLLPSQKD RIEEFVVKTV
LEAGSRPCPP LVIGIGIGGT FDEVAALAKE ALLQPIDRMD LFEQGLCDTL NTLGIGPMGL
GGKTSVLAVK MKKGACHTAS LPVAVNVQCW ANRRATIVVE VD
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