| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1947 |
|---|
| Symbol | |
|---|
| ID | 7270751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2063194 |
|---|
| End bp | 2063742 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643570561 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_002466974 |
|---|
| Protein GI | 219852542 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.427256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0750977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCACG AAGTGAGGTT CTCGGGTTTC GGGGGCCAGG GGATCATCCT CTCAGCGGTG
ATCGTCGGAC GGGCTGCGGT GATGTACGAT CACACCTTTG CCGTTCAGAC CCAGGTTTAT
GGCCCGGAGG CACGGGGCGG GGCCTCGATG AGTGCGGTCG TCATCGACGA TCAGCAGATC
CTGTACCCCA AGGTCGCGAA CCCGGACCTC TTTGTGATCA TGTCACAGGA AGGGTTCGAG
AAGTATGGTG CTACTGCCCC CGAGGGGGCG ACAATGCTGC TGGATGCAGG GCTCGTCCAC
AGCCGGCCTG CCTGCCGGTA CATCGAGGTG CCGGCGACAG AGTCCGCACG GACGATCCTC
GGGAAGACGA TCTTCGCCAA CATCGTGATG CTCGGCGCGC TGGTGGCTGC CACCGGCGTG
GTCAGCAGGG ACGCGATTGA ACGTGCCGTC CTGGACAGTG TCCCGAAAGG AACCGAGGAA
TCGAACCTTC GGGCTTTGAG GCTGGGATTT GACTATGGAT CAGGGGAACG ATCAGAGGAA
CATGCATGA
|
|---|
| Protein sequence | MRHEVRFSGF GGQGIILSAV IVGRAAVMYD HTFAVQTQVY GPEARGGASM SAVVIDDQQI
LYPKVANPDL FVIMSQEGFE KYGATAPEGA TMLLDAGLVH SRPACRYIEV PATESARTIL
GKTIFANIVM LGALVAATGV VSRDAIERAV LDSVPKGTEE SNLRALRLGF DYGSGERSEE
HA
|
|---|
| |