| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1945 |
|---|
| Symbol | |
|---|
| ID | 7270749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2061252 |
|---|
| End bp | 2062118 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643570559 |
|---|
| Product | succinyl-CoA synthetase, alpha subunit |
|---|
| Protein accession | YP_002466972 |
|---|
| Protein GI | 219852540 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0652138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0685682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATG GCGATAAATC CCTCGGCGTG ATCGTGCAGG GTGCGACCGG CAAACAGGGG
GCGTTTCACA TCAACCTGAT GAACGAGTAC GCTCGTTCGG TCGGGGGCCG GGGGGTTGTG
GCCGGGGTCA CGCCTGGCAG GGGCGGCCAG GAGGTGCATG GAGTGCCGGT GTACAACAGC
GTCCATGAGG CGCTCGCCGA GCACGATGCG ACGGCCAGTG TCCTCTTCGT CCCGGGGAAG
GCGGCGGGCG ATTCGATCAT GGAGGCGGCC TCGGCCGGCC TCGAACTCGT TGTCGCGATC
ACCGAGCATA TCCCGGTCCA CGATACGATG AAGGCGGTCG CCTATGCCAA ACTGCATGAC
TGTGCCGTCA TCGGTCCGAA CTGTCCGGGC CTCCTCTCGC CCGGCGAGGT GAAACTCGGG
ATCATGCCGG CCCATCTCTT CACACGGGGG CATGTCGGCG TGATCTCACG CAGCGGGACC
CTCACCTATG AGATCGTCGA TGAACTGACC CGGGCCGGGA TCGGCCAGAG CACGGTCGTC
GGGATCGGGG GCGACCCGGT GATCGGGCAG ACCTTCGTCG ACCTGCTCGA TCGGTTCGAA
GAGGATCCCG AGACCAGGGC CGTCGTCCTG GTCGGAGAGG TCGGCGGTGC GCTCGAGCAG
GAGGGGGCGG CATCCACCGA CCTGCCGATC GTCGCCTACA TCGCCGGGGT ATCGGCCCCG
CCAGACAAGC GGATGGGGCA TGCCGGCGCT ATCGTCGAAG GCGGTGAGGG GGATGCCGGG
TCCAAGATCC GGCATCTGCA GAACCAGGGG GTGACGGTTG CCCAGAGGCC ATCAGAGATC
CCATGTCTCA TCCGGAACCT GCTATGA
|
|---|
| Protein sequence | MIYGDKSLGV IVQGATGKQG AFHINLMNEY ARSVGGRGVV AGVTPGRGGQ EVHGVPVYNS
VHEALAEHDA TASVLFVPGK AAGDSIMEAA SAGLELVVAI TEHIPVHDTM KAVAYAKLHD
CAVIGPNCPG LLSPGEVKLG IMPAHLFTRG HVGVISRSGT LTYEIVDELT RAGIGQSTVV
GIGGDPVIGQ TFVDLLDRFE EDPETRAVVL VGEVGGALEQ EGAASTDLPI VAYIAGVSAP
PDKRMGHAGA IVEGGEGDAG SKIRHLQNQG VTVAQRPSEI PCLIRNLL
|
|---|
| |