Gene Mpal_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1942 
Symbol 
ID7270746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2058699 
End bp2059202 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content55% 
IMG OID643570556 
Producthypothetical protein 
Protein accessionYP_002466969 
Protein GI219852537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0030392 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.22937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGA TCTATTCACT TGCAATACTG CTGGTCCTGC TCTTTCTCTC AGCAGGGTGC 
ACCAGTCAGG GGACCGATGC CAATCATACT GGAAATCAGA CCGAAAACCA GACCGTTAAT
CAGTCAGAGA CGGCGATCAT CGGTTCATGG GTAGAGTCCG GAGACTCTCA GAACATTCTG
ATCCAGTTCC AGGAAAATGG AACTGCACAG ATGCGGTTCC GTTCCACGGC AGGTTCGACC
AACGATACCT TCGTCGACCG TATCGGACAC TGGGAACAGA CGGGGTCCAA TGGTCTGGTG
AACCTTTCAT ACCTGGGTCC GACCAGCAAC GAGTCGCGGG TCCTGACCAT GGCCGTCTTG
AATAATGGGA CCGCCCTGGT GAAGCGGGTG TATAACGGTA CCCAGGAGAC CACCAGTGCG
AGCGGTCCAG ACCTCAGTTT CAGGCGGGCG GAGTGGCCGT CACAGAGCTC TGCGCTCAGT
CTCGATAACC CCCTCAAAAA ATAA
 
Protein sequence
MKTIYSLAIL LVLLFLSAGC TSQGTDANHT GNQTENQTVN QSETAIIGSW VESGDSQNIL 
IQFQENGTAQ MRFRSTAGST NDTFVDRIGH WEQTGSNGLV NLSYLGPTSN ESRVLTMAVL
NNGTALVKRV YNGTQETTSA SGPDLSFRRA EWPSQSSALS LDNPLKK