| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1938 |
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| Symbol | |
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| ID | 7270742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2054898 |
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| End bp | 2055536 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643570552 |
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| Product | hypothetical protein |
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| Protein accession | YP_002466965 |
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| Protein GI | 219852533 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.186563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.681719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTTA TATCTCTGAT CTCGGGAGGA ATCGACTCAC CAGTGGCGAC GTATCTCATG
ATCTGTCGCG GCGTTGAGAT CGTGGCGGTC CACATGGACA ACCGCCCCTT TACCGATGAA
AAAAACCTGG ACAAGACCCT GAACCTGGTC CGACACCTCA GGACACTGAC CGGCACACCG
ATCAGGACCT ACGTGGTTCC TCACGGACCA AATCACACCA CCATTGCACG GAACTGCAAT
CGTCACCTGC ACTGCCTCTT CTGCCGGAGG ATGATGTACC GGATCGCAGA ACAGATTGCA
GAAAAAGAAG GTGCTGACGG GATCCTGACC GGTGAGTCGG TAGGGCAGGT GGCCTCGCAG
ACTCTCCAGA ACCTTTCGGT AGTGAACCGG GCCATAAAAT ATCCAGTCAT CCGCCCTCTC
ATTGGTTTTG ACAAGGTCGA GATCATTGAG ATCGCCCGCA CGATCGGTAC GTACGAGATC
TCCACGCTCC CCGGCCTCTG CTGCACCATC GTTCCCAAAC ACCCCTCGAC TGCCGCAAAG
CTGGAAGATG TCCTCAATGA GGAGAGCAAA ATTGATATCG ATTCTCTGGT AGAAAAATCT
CTGGAAGGGA TGTATGTATT CGGTCCTGAA ACCCTGTAA
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| Protein sequence | MKLISLISGG IDSPVATYLM ICRGVEIVAV HMDNRPFTDE KNLDKTLNLV RHLRTLTGTP
IRTYVVPHGP NHTTIARNCN RHLHCLFCRR MMYRIAEQIA EKEGADGILT GESVGQVASQ
TLQNLSVVNR AIKYPVIRPL IGFDKVEIIE IARTIGTYEI STLPGLCCTI VPKHPSTAAK
LEDVLNEESK IDIDSLVEKS LEGMYVFGPE TL
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