| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1918 |
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| Symbol | |
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| ID | 7272735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2033286 |
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| End bp | 2035184 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643570532 |
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| Product | putative cache sensor protein |
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| Protein accession | YP_002466945 |
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| Protein GI | 219852513 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.149363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.217415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGC GTGGATGGTA TATCATCGCA GGCGCCCTGC TCGTCGTTCT GATGATCGGT
GCGGGCTGCA CAACAGTAAA GACAGAGACA CAAGATAACC TGACCTTTTA CACCGAGCAG
TATCCCCCGT ACAACTACCT GGAGAACGAC ACACCGACCG GGATCATGGT CGACATGCTG
AACTCGACGA TGAAGGAGAT GGGCAAGGGA CCGGCCGATA TCCGGGTCGC CTGCTGGACC
AGCGCCTACC AGACCGTGCT CACCACACCG AACACGGTGC TCTTTGCGAC CTCGCGCACC
TCTGACCGTG AATCGCTCTT CAAGTGGGCC GGCCCGGTCC TGACTGAGAA GGCGGTGGTC
TTCTCCTACC GCGAACGACC GGTCGTCGTG AACGGGACCG ATGATCTGAA ACACTACCGG
ATCGGAGTGG AGGCCGACGA TGCAGCAATC GGAAAGCTCC TCGACCAAGG GGTCCCGAAG
GACCAGATTG TGATCGCCCC CGACCCCCTG ACGATGATCC AGCAGACCCA GAACGGCACG
ACCGACCTCT TCGCTTACGG CGAGGGAGCC GGCCACTTCT GGATCGCACA GTCAGGGACC
CGGCCCGGCC TCTTCTCGAC GGTCGCCACC ATCGGGGAGG ATCCGGTCTA TTATGCGTTC
AACCGGAACA CCTCGGACCA GACGGTCCAG GCCTTCCAGC AGGCCCTCAA CCAGACCACC
CAGAAGGATC TCGATCAGAT TCTCGCCAAA TACCTGCCAG AGTACGGCCT CGCCCGGCTC
AATTATCTGA CCGAAGAGGC CAGGCCGTAC AACTTTGAGG CGAATGGGAC CGCGCAGGGG
ATCTCGGTCG ACCTTCTCAG GGCTGCCCTC TCCAGGCTCG ATGTTCCGGA AAATGCCACC
TCCGTCAGGG TCGTCCCCTG GACGGAAGGG TATGCGAGTG CACAAAACAA CAGCAGTACA
GTCCTCTTCT CAACCTCACG GACCCCTGAC CGGGAGAACC TCTTCCAGTG GGCCGGGCCG
ATCGGGCGAA ATGACTACGT CCTCTTTGCA GATCAGACCA GAAAGATCAC GATCACGAAC
ACCACCGACC TCACCCGGTA TCGGATCGGT GCCGTCACCG ATGACATCAC GGTCCAGTAC
CTGGCCGACC ATGGTGTGAC AAAGGATCGG TTGATCCTCG ATTCCGATGC TGCATCAGCG
GCCAGGCGGC TCGCCTCAGG GGAGACCGAT CTCTTTGCCT ATGCAGCGCT CCCGGGCCGG
CTGGTGCTGA ACAGCACGGT ATCTGATCCG GAACGGTTCC AGGAGGTATA CACCATCGGG
GGAGGCGACT TCTATTATGC ATTCAACCGG AATGTTTCAC CCCTGCTGGT CAGCGCTTTC
CAGCACGGCC TCGACGACGT GAAGAACCAG AAGGACCAGA ACGGAGTCTC GGACTATGAA
CGGATCATGT ACAGGTATAC CGCGGTCAGG TCTTCGACCT CGGGGGTGAA CGAAAGCCAG
GTGACCGCTC TCATCAACCG GACTAGCACC GATCTGGCTG GTGACGCAAC TGGAACGCTT
CGGCGGATCA ATGCCGGCGA GGCCCCGTAC CGCGACCAGA CTCAGAAAGA CCTCTACGTC
TTCGTCTACG ACACGAATGT GACGATGGTC GCCCATGCTG ACAACCCGAC ACTGGTCGGG
ACGAACTACC ACAACAAGAC TGATGTCACT GGCTATCCAT TCCGCGACCG GATCGTGCAG
GGGGCGTTGA AGAACACCAC CGGCTGGGTC GACTATGTCT ACACGAACCC GACCGACTTC
AACCTCTTCA ACAAGACGAC TTATTACCGA CTGGTTCGCG GGAGCGACAA TCGGGACTAC
GTGGTCTGTG CCGGCACCTT CAAGGAGAAC TCAACCTGA
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| Protein sequence | MMKRGWYIIA GALLVVLMIG AGCTTVKTET QDNLTFYTEQ YPPYNYLEND TPTGIMVDML
NSTMKEMGKG PADIRVACWT SAYQTVLTTP NTVLFATSRT SDRESLFKWA GPVLTEKAVV
FSYRERPVVV NGTDDLKHYR IGVEADDAAI GKLLDQGVPK DQIVIAPDPL TMIQQTQNGT
TDLFAYGEGA GHFWIAQSGT RPGLFSTVAT IGEDPVYYAF NRNTSDQTVQ AFQQALNQTT
QKDLDQILAK YLPEYGLARL NYLTEEARPY NFEANGTAQG ISVDLLRAAL SRLDVPENAT
SVRVVPWTEG YASAQNNSST VLFSTSRTPD RENLFQWAGP IGRNDYVLFA DQTRKITITN
TTDLTRYRIG AVTDDITVQY LADHGVTKDR LILDSDAASA ARRLASGETD LFAYAALPGR
LVLNSTVSDP ERFQEVYTIG GGDFYYAFNR NVSPLLVSAF QHGLDDVKNQ KDQNGVSDYE
RIMYRYTAVR SSTSGVNESQ VTALINRTST DLAGDATGTL RRINAGEAPY RDQTQKDLYV
FVYDTNVTMV AHADNPTLVG TNYHNKTDVT GYPFRDRIVQ GALKNTTGWV DYVYTNPTDF
NLFNKTTYYR LVRGSDNRDY VVCAGTFKEN ST
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