| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1916 |
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| Symbol | |
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| ID | 7272733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2031565 |
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| End bp | 2033016 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643570530 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002466943 |
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| Protein GI | 219852511 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.114513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCAG GCGCCCTGCT CGTCGTTCTG ATGATCGGAG CCGGGTGCAC GACAGTAAAG
AACGAAACCG GAGATAAACT GGTCTTCTAC ACCGATCAGT ATCCTCCCTT CAGTAGCCAG
GAGAACGGCA CGCCAACCGG GATCATGGTC GACATGCTGA ACTCGACGAT GACAGAGATG
GGCAGGGGGC CGGCCGACAT CAAGGTCACC TGCTGGACCA GTGCCTATCA GACTGTCCTC
TCCACCCAAA ATACGGTGCT CTTTTCGACC ACACGCACCT CTGATCGTGA GCAGCTCTTC
AAGTGGGCCG GCCCGGTCCT GACCGATAAG GTGGTGGCCT TCTCCTACCG CGAACGACCG
GTCGTGGTGA ACAGCACCGC CGATCTGAAA CGCTACCGGA TCGGAGCGGA GGAGAACGAC
GCAGTCATCG GGAACCTCCT TTCCCTCGGG GTTCCGAAGG AGCAGATCGT GACCGCTCCA
GACCCCCAGA CCATGATCAG GCAGGTCCAG AACGGCTCGA CCGACCTCTT CGCCTATGGA
GAGGAAGCCG GTAACTACTG GATCGCACAG TCCGGGACCA GTTCAGGCCT CTTCTCAACA
GTCGTCACCA TCAGGGAGGA CCCGGTCTAT TACGCGTTCA ACCGGAACAC CTCGGACCAG
ACCGTCCAGG CCTTCCAGCA GGCCCTCAAC CGGTCTATCC AGTCCGATCT CGACCGGGTT
CTCGATGCAA ATCTGCCCGA GCGTAGCCTC GCCCGGCTCA ATTATCTGAC TGAAGAGTCC
CGGCCGTACA ACTTCGTGGC GAACGGGACC GTGCAGGGGA TCTCGGTCGA TCTCCTCAAC
GCGACGCTCT CCCGGCTCGG TGTCCCGGCG AATGCCACAT CAGTCAGGAT CGTCCCCTGG
AATGAGGGGT ATACAGATAC ACTGACGAAG AACGATACGG TCCTCTTCGC GACCGCCCGA
AACCCTGAAC GTGAGAACCT CTTCCTGTGG GCAGGACCGA TCGGGCGGCA CGATTATGTT
CTCTTTGCGG ACAGGACCAG AAATATCTCG ATCTCGACCG ATGCCGACCT CGCCCGGTAC
CGGATCGGAG CCGTCACTGG TGACGTCGGA GTCAAGTACC TGGCCGACCA TGGTGTCCCA
AAAGATCGGC TGGTGCTCGA TGCCAATGCA ACAACAGGGG TTCAGCGACT CGCCTCCGGA
GAGATCGACC TCTTCGCCGA TTCCATGGAG CCCAACCAGA CGGAACTGAA CAGCACGGTC
GCGAATTCGG AACGGTTCCA GAATGTATAC ACCATCGGGG GGAGCGAACT CTACTATGCA
TTCAACCGGA ATGTCTCGCC AGAGCTGGTC AGGGCCTTCC AGCGGGGGCT CGATAGCGTG
AAGAACGAGA AGGATACGAG CGGGGTCTCG GACTACGAAC GGATCATGGA AAAGTACGCA
GGGGTCAGGT GA
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| Protein sequence | MVAGALLVVL MIGAGCTTVK NETGDKLVFY TDQYPPFSSQ ENGTPTGIMV DMLNSTMTEM
GRGPADIKVT CWTSAYQTVL STQNTVLFST TRTSDREQLF KWAGPVLTDK VVAFSYRERP
VVVNSTADLK RYRIGAEEND AVIGNLLSLG VPKEQIVTAP DPQTMIRQVQ NGSTDLFAYG
EEAGNYWIAQ SGTSSGLFST VVTIREDPVY YAFNRNTSDQ TVQAFQQALN RSIQSDLDRV
LDANLPERSL ARLNYLTEES RPYNFVANGT VQGISVDLLN ATLSRLGVPA NATSVRIVPW
NEGYTDTLTK NDTVLFATAR NPERENLFLW AGPIGRHDYV LFADRTRNIS ISTDADLARY
RIGAVTGDVG VKYLADHGVP KDRLVLDANA TTGVQRLASG EIDLFADSME PNQTELNSTV
ANSERFQNVY TIGGSELYYA FNRNVSPELV RAFQRGLDSV KNEKDTSGVS DYERIMEKYA
GVR
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