Gene Mpal_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1913 
Symbol 
ID7272730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2028461 
End bp2029135 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID643570527 
Producthypothetical protein 
Protein accessionYP_002466940 
Protein GI219852508 
COG category[S] Function unknown 
COG ID[COG4066] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0906214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCC ATCGATTTCC GTTCCTGAAT AAGACCAGAA GAGATACCCC AGCGGCCGGG 
ATGATCCGGG AGGAGTGCGA TCTTCTCGCC GGCCCGGCCA CGAGAGGCGA ACTCGGCACC
GCCCTGGCCG CGATCGTGCT GCTGTACACC CCCGCCGACA TCAGGCAGAT GCAGAGGAAC
TTCAAGACGA AGATCAGGGA TATCGACGAG GATTACCGGG AACCGCTCTA TCTGAAGGTG
ACCGAGCACC TCCTCGGCAC CTACCAGCAG ATCCGGCTCC TCTCCCAGCA GGGGGCGTTC
TCGCGGATGG ACATCCCCGT CAGCCCGGAG AACAGCCGGT ACTGGGCGAT GGTCGCCGCC
GCATGCAGCG CCCGGGCAGA AGAGAAGGGC CCGCGACTGG CGTTCCTCAA CTACCTGCTC
GCCGGCTTCT GCATCTTCGT CCTCGATGAA CCCGCCCACC CGGTCGGCAC GCCCTTCCCG
GGCGGCGACA CCGTCGAATG CGAAGACGGG ATCTACTACT GCCCGGTCAG GGAGAAGTCC
AGCGAGATCG ATGCAGGGTT CTGCGGGTTC TGCCCTGCCC TGCAGACGCC CGAGGCCGGC
TACATCTCGC GGGGGGCGAG CGAGCACCGG AAGCAGGCCT ACATCGACCA TTACTTCCAC
AACTACAACG GGTGA
 
Protein sequence
MTIHRFPFLN KTRRDTPAAG MIREECDLLA GPATRGELGT ALAAIVLLYT PADIRQMQRN 
FKTKIRDIDE DYREPLYLKV TEHLLGTYQQ IRLLSQQGAF SRMDIPVSPE NSRYWAMVAA
ACSARAEEKG PRLAFLNYLL AGFCIFVLDE PAHPVGTPFP GGDTVECEDG IYYCPVREKS
SEIDAGFCGF CPALQTPEAG YISRGASEHR KQAYIDHYFH NYNG