Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1913 |
Symbol | |
ID | 7272730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2028461 |
End bp | 2029135 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643570527 |
Product | hypothetical protein |
Protein accession | YP_002466940 |
Protein GI | 219852508 |
COG category | [S] Function unknown |
COG ID | [COG4066] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0906214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCC ATCGATTTCC GTTCCTGAAT AAGACCAGAA GAGATACCCC AGCGGCCGGG ATGATCCGGG AGGAGTGCGA TCTTCTCGCC GGCCCGGCCA CGAGAGGCGA ACTCGGCACC GCCCTGGCCG CGATCGTGCT GCTGTACACC CCCGCCGACA TCAGGCAGAT GCAGAGGAAC TTCAAGACGA AGATCAGGGA TATCGACGAG GATTACCGGG AACCGCTCTA TCTGAAGGTG ACCGAGCACC TCCTCGGCAC CTACCAGCAG ATCCGGCTCC TCTCCCAGCA GGGGGCGTTC TCGCGGATGG ACATCCCCGT CAGCCCGGAG AACAGCCGGT ACTGGGCGAT GGTCGCCGCC GCATGCAGCG CCCGGGCAGA AGAGAAGGGC CCGCGACTGG CGTTCCTCAA CTACCTGCTC GCCGGCTTCT GCATCTTCGT CCTCGATGAA CCCGCCCACC CGGTCGGCAC GCCCTTCCCG GGCGGCGACA CCGTCGAATG CGAAGACGGG ATCTACTACT GCCCGGTCAG GGAGAAGTCC AGCGAGATCG ATGCAGGGTT CTGCGGGTTC TGCCCTGCCC TGCAGACGCC CGAGGCCGGC TACATCTCGC GGGGGGCGAG CGAGCACCGG AAGCAGGCCT ACATCGACCA TTACTTCCAC AACTACAACG GGTGA
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Protein sequence | MTIHRFPFLN KTRRDTPAAG MIREECDLLA GPATRGELGT ALAAIVLLYT PADIRQMQRN FKTKIRDIDE DYREPLYLKV TEHLLGTYQQ IRLLSQQGAF SRMDIPVSPE NSRYWAMVAA ACSARAEEKG PRLAFLNYLL AGFCIFVLDE PAHPVGTPFP GGDTVECEDG IYYCPVREKS SEIDAGFCGF CPALQTPEAG YISRGASEHR KQAYIDHYFH NYNG
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