Gene Mpal_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1880 
Symbol 
ID7272697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1996398 
End bp1997120 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content55% 
IMG OID643570495 
ProductMethyltransferase type 11 
Protein accessionYP_002466908 
Protein GI219852476 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGAG ATGAGATCAA GGTACAGCGC CATTATGATG AGATGGCCGA GGTATATGAC 
CGCAGGTATG ATTACCGGCG GGGGAGATGC TACCATGCGC ATATCTCTCA ACATGTGATG
AATGGGCTGG TTCAGGGGGG GTACCTTCTC GACATTGGCT GCGGGACCGG GCTGTTTGTC
AATCGTTACA CCGAAAAAGG CGGGACAGCC GTCGGGCTCG ACATCAGCAG CGGGATGATC
GAGAAAGCGG TAGAGCGCTG CCCTGACAGT GACTTCACCG TTGGCGACGG GGACGTACTT
CCGTTCAAGG ACAGCACCTT TGATGCGGTT GCAAGCCTGC TCGCCTTCAG TTATCTCACA
GAGCCCGGCA GAATGTTGTC GGAGGCATAC CGTGTCCTCA AGCCCGGGGG TACCATCTCG
GTCTGCACCC TCGGTAAAAA CCTGCTGACT GCCGGCCTCC CGGCGATCCA CCATATCGGC
GAGGCCATGA AGATCCAGCA GGTCGGCATG GGCGATTTCG GTGAACACTA TTATAACGAG
AAGGAGATGC GGAAGCTCTT TTCAGAGGCT GGATTCACCG GTGTGCAGGT GAAGCGGTGC
TCCTTTGCAC ATCTGAACCT CGTCGAACCG GTCTTCGATA TCGCCAAGAA GATCGAGCCG
TTCGTTGAGC GCAGACTCCC GTGTTTTGCC TATAATATCT GTGTAAAAGG GAAAAAAGAG
TGA
 
Protein sequence
MIGDEIKVQR HYDEMAEVYD RRYDYRRGRC YHAHISQHVM NGLVQGGYLL DIGCGTGLFV 
NRYTEKGGTA VGLDISSGMI EKAVERCPDS DFTVGDGDVL PFKDSTFDAV ASLLAFSYLT
EPGRMLSEAY RVLKPGGTIS VCTLGKNLLT AGLPAIHHIG EAMKIQQVGM GDFGEHYYNE
KEMRKLFSEA GFTGVQVKRC SFAHLNLVEP VFDIAKKIEP FVERRLPCFA YNICVKGKKE